RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 SERTAD4Q9NUC0 356 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 MTCH1Q9NZJ7 389 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 TRAPPC2LQ9UL33 140 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 HS3ST3A1Q9Y663 406 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 A0A0U1RQV5 110 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 MDFIC2A0A1B0GVS7 189 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 SCO2A0A1W2PP80 73 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 KITLGP21583 273 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 AMTP48728 403 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 HBG1P69891 147 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 HBG2P69892 147 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 SRPXP78539 464 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 DAZAP2Q15038 168 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-217ENST00000555022 WIPI1Q5MNZ9 446 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-217ENST00000555022 MRPL21Q7Z2W9 205 aaKnown RBP7.54□□□□□ -1.2
SYNE2-217ENST00000555022 SAXO1Q8IYX7 474 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 BEND2Q8NDZ0 799 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 CLDN23Q96B33 292 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 NEIL1Q96FI4 390 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-217ENST00000555022 TMEM56Q96MV1 263 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 MCRIP2Q9BUT9 160 aaKnown RBP7.54□□□□□ -1.2
SYNE2-217ENST00000555022 CFHR5Q9BXR6 569 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 TMEM56-RWDD3S4R434 201 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 F6UZH7 168 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 CA1P00915 261 aaPredicted RBP7.53□□□□□ -1.2
SYNE2-217ENST00000555022 CRISP2P16562 243 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 UCP1P25874 307 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 GNB1P62873 340 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 MRPS11P82912 194 aaKnown RBP7.53□□□□□ -1.2
SYNE2-217ENST00000555022 CPEB3Q8NE35 698 aaKnown RBP7.53□□□□□ -1.2
SYNE2-217ENST00000555022 SPACA9Q96E40 222 aaPredicted RBP7.53□□□□□ -1.2
SYNE2-217ENST00000555022 ETV2O00321 342 aaPredicted RBP7.53□□□□□ -1.2
SYNE2-217ENST00000555022 DUX1O43812 170 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 ZFAND5O76080 213 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 OR5G3P0C626 314 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 EN2P19622 333 aaPredicted RBP7.53□□□□□ -1.2
SYNE2-217ENST00000555022 RELQ04864 619 aaPredicted RBP7.53□□□□□ -1.2
SYNE2-217ENST00000555022 ZIC4Q8N9L1 334 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 FAM122AQ96E09 287 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 SMDT1Q9H4I9 107 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 GCM1Q9NP62 436 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 FBXL7Q9UJT9 491 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 DUXBA0A1W2PPF3 345 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 SNURFLB1AK76 121 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 S100GP29377 79 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 HYAL1Q12794 435 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 SPATA45Q537H7 98 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 LBHQ53QV2 105 aaPredicted RBP7.53□□□□□ -1.2
SYNE2-217ENST00000555022 DCAF10Q5QP82 559 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 C1orf53Q5VUE5 145 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 ABLIM2Q6H8Q1 611 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 CTDSP1Q9GZU7 261 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 WNT5BQ9H1J7 359 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 MTIF3Q9H2K0 278 aaKnown RBP7.53□□□□□ -1.2
SYNE2-217ENST00000555022 DECR2Q9NUI1 292 aa7.53□□□□□ -1.2
SYNE2-217ENST00000555022 DIRC3C9JPN6 131 aa7.52□□□□□ -1.21
SYNE2-217ENST00000555022 CEACAM6P40199 344 aa7.52□□□□□ -1.21
SYNE2-217ENST00000555022 DUSP3P51452 185 aaPredicted RBP7.52□□□□□ -1.21
SYNE2-217ENST00000555022 FUT6P51993 359 aa7.52□□□□□ -1.21
SYNE2-217ENST00000555022 ACOT6Q3I5F7 207 aaPredicted RBP7.52□□□□□ -1.21
SYNE2-217ENST00000555022 FOXB1Q99853 325 aa7.52□□□□□ -1.21
SYNE2-217ENST00000555022 MRPL18Q9H0U6 180 aaKnown RBP7.52□□□□□ -1.21
SYNE2-217ENST00000555022 BOD1L1Q8NFC6 3051 aa7.52□□□□□ -1.21
SYNE2-217ENST00000555022 A0A1W2PPV4 95 aa7.52□□□□□ -1.21
SYNE2-217ENST00000555022 SYNGR3O43761 229 aa7.52□□□□□ -1.21
SYNE2-217ENST00000555022 IFI6P09912 130 aa7.52□□□□□ -1.21
SYNE2-217ENST00000555022 RFPL3SP0C7P2 107 aa7.52□□□□□ -1.21
SYNE2-217ENST00000555022 HNRNPA3P51991 378 aaKnown RBP7.52□□□□□ -1.21
SYNE2-217ENST00000555022 RELBQ01201 579 aa7.52□□□□□ -1.21
SYNE2-217ENST00000555022 MSMO1Q15800 293 aa7.52□□□□□ -1.21
SYNE2-217ENST00000555022 LRRC75BQ2VPJ9 315 aa7.52□□□□□ -1.21
SYNE2-217ENST00000555022 NUFIP2Q7Z417 695 aaKnown RBP7.52□□□□□ -1.21
SYNE2-217ENST00000555022 MKXQ8IYA7 352 aa7.52□□□□□ -1.21
SYNE2-217ENST00000555022 OR8I2Q8N0Y5 310 aa7.52□□□□□ -1.21
SYNE2-217ENST00000555022 RNASEH2CQ8TDP1 164 aaKnown RBP7.52□□□□□ -1.21
SYNE2-217ENST00000555022 SGK494Q96LW2 274 aa7.52□□□□□ -1.21
SYNE2-217ENST00000555022 TMEM106BQ9NUM4 274 aa7.52□□□□□ -1.21
SYNE2-217ENST00000555022 C20orf202A1L168 122 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 GRPP07492 148 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 MGST1P10620 155 aaKnown RBP7.51□□□□□ -1.21
SYNE2-217ENST00000555022 HOXA6P31267 233 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 SPATA31B1PQ5VZV4 182 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 PLXDC1Q8IUK5 500 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 NFAM1Q8NET5 270 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-217ENST00000555022 APH1AQ96BI3 265 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 PINX1Q96BK5 328 aaKnown RBP7.51□□□□□ -1.21
SYNE2-217ENST00000555022 STARD4Q96DR4 205 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 ABHD14BQ96IU4 210 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 MMP17Q9ULZ9 603 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 TRBV20OR9-2A0A075B6H5 130 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 TMEM210A6NLX4 147 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 FAM166BA8MTA8 275 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 CCL25O15444 150 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 S1PR2O95136 353 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 CCKARP32238 428 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 CDC34P49427 236 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-217ENST00000555022 TMEM183BQ1AE95 376 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 KRTCAP3Q53RY4 240 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 MIC13Q5XKP0 118 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 TMEM211Q6ICI0 200 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms