RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 A0A1W2PPI3 338 aa13.27□□□□□ -0.29
SPTLC2-203ENST00000554901 CENPXA8MT69 81 aa13.27□□□□□ -0.29
SPTLC2-203ENST00000554901 UPK1BO75841 260 aa13.27□□□□□ -0.29
SPTLC2-203ENST00000554901 BRS3P32247 399 aa13.27□□□□□ -0.29
SPTLC2-203ENST00000554901 FXYD4P59646 89 aa13.27□□□□□ -0.29
SPTLC2-203ENST00000554901 AADACL3Q5VUY0 350 aa13.27□□□□□ -0.29
SPTLC2-203ENST00000554901 Q6YL49 198 aa13.27□□□□□ -0.29
SPTLC2-203ENST00000554901 DYNAPQ8N1N2 210 aa13.27□□□□□ -0.29
SPTLC2-203ENST00000554901 ZNF418Q8TF45 676 aaPredicted RBP13.27□□□□□ -0.29
SPTLC2-203ENST00000554901 ZDHHC16Q969W1 377 aa13.27□□□□□ -0.29
SPTLC2-203ENST00000554901 SLC5A7Q9GZV3 580 aa13.27□□□□□ -0.29
SPTLC2-203ENST00000554901 SDHAF2Q9NX18 166 aa13.27□□□□□ -0.29
SPTLC2-203ENST00000554901 A0A0A6YYJ9 748 aa13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 IGHV1-3A0A0C4DH29 117 aa13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 OR5H14A6NHG9 310 aa13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 J3QRK9 145 aa13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 TAGLNQ01995 201 aaKnown RBP13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 SURF2Q15527 256 aaPredicted RBP13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 LRRC75BQ2VPJ9 315 aa13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 FAAP20Q6NZ36 180 aa13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 SLC38A6Q8IZM9 456 aa13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 TMEM86BQ8N661 226 aa13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 DRAM1Q8N682 238 aa13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 OR51S1Q8NGJ8 323 aa13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 SECTM1Q8WVN6 248 aa13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 SSMEM1Q8WWF3 244 aa13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 ADTRPQ96IZ2 230 aa13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 ZNF48Q96MX3 618 aaPredicted RBP13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 DPAGT1Q9H3H5 408 aa13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 MCUBQ9NWR8 336 aa13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 SOX21Q9Y651 276 aaPredicted RBP13.26□□□□□ -0.29
SPTLC2-203ENST00000554901 PROP1O75360 226 aa13.25□□□□□ -0.29
SPTLC2-203ENST00000554901 IGLV2-14P01704 120 aa13.25□□□□□ -0.29
SPTLC2-203ENST00000554901 DIAPH2-AS1Q14236 149 aa13.25□□□□□ -0.29
SPTLC2-203ENST00000554901 SCGB2B2Q4G0G5 96 aa13.25□□□□□ -0.29
SPTLC2-203ENST00000554901 RPL39P5Q59GN2 51 aa13.25□□□□□ -0.29
SPTLC2-203ENST00000554901 CMTM1Q8IZ96 169 aa13.25□□□□□ -0.29
SPTLC2-203ENST00000554901 BVESQ8NE79 360 aa13.25□□□□□ -0.29
SPTLC2-203ENST00000554901 OR5R1Q8NH85 324 aa13.25□□□□□ -0.29
SPTLC2-203ENST00000554901 ZNF486Q96H40 463 aaPredicted RBP13.25□□□□□ -0.29
SPTLC2-203ENST00000554901 JMJD8Q96S16 334 aa13.25□□□□□ -0.29
SPTLC2-203ENST00000554901 NABP2Q9BQ15 211 aa13.25□□□□□ -0.29
SPTLC2-203ENST00000554901 FXYD6Q9H0Q3 95 aa13.25□□□□□ -0.29
SPTLC2-203ENST00000554901 ABCB10Q9NRK6 738 aa13.25□□□□□ -0.29
SPTLC2-203ENST00000554901 POMT1Q9Y6A1 747 aa13.25□□□□□ -0.29
SPTLC2-203ENST00000554901 CD1BP29016 333 aa13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 S100GP29377 79 aa13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 GNRHRP30968 328 aa13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 REG1BP48304 166 aa13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 THBS3P49746 956 aa13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 ZNF66Q6ZN08 573 aa13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 IDO2Q6ZQW0 420 aa13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 THNSL2Q86YJ6 484 aa13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 SIGLECL1Q8N7X8 197 aa13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 ZFAND1Q8TCF1 268 aa13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 CFHR4Q92496 578 aa13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 SCGB3A2Q96PL1 93 aa13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 HSD17B10Q99714 261 aaKnown RBP13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 SSX3Q99909 188 aa13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 RSRP1Q9BUV0 290 aa13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 OCEL1Q9H607 264 aa13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 CCL28Q9NRJ3 127 aa13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 NIPBLQ6KC79 2804 aaeCLIP13.24□□□□□ -0.29
SPTLC2-203ENST00000554901 MDFIC2A0A1B0GVS7 189 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 BTBD17A6NE02 478 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 FAM90A9PA6NNJ1 464 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 M0R1X1 148 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 GPR31O00270 319 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 TIMM23O14925 209 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 MC5RP33032 325 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 IER3P46695 156 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 MOB3BQ86TA1 216 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 OR5AN1Q8NGI8 311 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 SLC25A21Q9BQT8 299 aaPredicted RBP13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 MRPL20Q9BYC9 149 aaKnown RBP13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 CLDN34H7C241 214 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 PLA2G10O15496 165 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 CT45A6P0DMU7 189 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 CT45A5P0DMU8 189 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 CT45A7P0DMV0 189 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 DUTP33316 252 aaKnown RBP13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 HILS1P60008 231 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 ZNF818PQ6ZRF7 136 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 OR13C8Q8NGS7 320 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 C5orf30Q96GV9 206 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 PITPNC1Q9UKF7 332 aa13.23□□□□□ -0.29
SPTLC2-203ENST00000554901 LYRM1O43325 122 aa13.22□□□□□ -0.29
SPTLC2-203ENST00000554901 IFNA2P01563 188 aa13.22□□□□□ -0.29
SPTLC2-203ENST00000554901 FAM106CPP0CH98 169 aa13.22□□□□□ -0.29
SPTLC2-203ENST00000554901 PGAM2P15259 253 aa13.22□□□□□ -0.29
SPTLC2-203ENST00000554901 RAB13P51153 203 aa13.22□□□□□ -0.29
SPTLC2-203ENST00000554901 BAMBIQ13145 260 aa13.22□□□□□ -0.29
SPTLC2-203ENST00000554901 CATR1Q13166 79 aa13.22□□□□□ -0.29
SPTLC2-203ENST00000554901 ASAH1Q13510 395 aa13.22□□□□□ -0.29
SPTLC2-203ENST00000554901 EIF4EBP1Q13541 118 aaPredicted RBP13.22□□□□□ -0.29
SPTLC2-203ENST00000554901 EBI3Q14213 229 aa13.22□□□□□ -0.29
SPTLC2-203ENST00000554901 LIAT1Q6ZQX7 453 aa13.22□□□□□ -0.29
SPTLC2-203ENST00000554901 PIFOQ8TCI5 191 aa13.22□□□□□ -0.29
SPTLC2-203ENST00000554901 MRGPRFQ96AM1 343 aa13.22□□□□□ -0.29
SPTLC2-203ENST00000554901 PALMDQ9NP74 551 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms