RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 CST9Q5W186 159 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 OR4K13Q8NH42 304 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 TMBIM1Q969X1 311 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 MBOAT7Q96N66 472 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 C20orf166-AS1Q96NR2 134 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 TMEM109Q9BVC6 243 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 SNX12Q9UMY4 172 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 NOSIPQ9Y314 301 aaKnown RBP1.41□□□□□ -2.18
SCFD1-213ENST00000554776 HEY1Q9Y5J3 304 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 ALG5Q9Y673 324 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 V9GYY5 206 aaPredicted RBP1.41□□□□□ -2.18
SCFD1-213ENST00000554776 DSCAML1Q8TD84 2053 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 CHD5Q8TDI0 1954 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 TMED7-TICAM2A0A0A6YYA0 188 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 TRAV8-1A0A0A6YYK1 113 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 A0A0J9YX75 114 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 MDFIC2A0A1B0GVS7 189 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 H0Y980 276 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 M0QZ92 97 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 PFDN6O15212 129 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 GSTZ1O43708 216 aaPredicted RBP1.4□□□□□ -2.19
SCFD1-213ENST00000554776 ZNF189O75820 626 aaPredicted RBP1.4□□□□□ -2.19
SCFD1-213ENST00000554776 IGHV3-30-3P0DP02 117 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 OPRM1P35372 400 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 RWDD2BP57060 319 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 TMEM33P57088 247 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 CXCR4P61073 352 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 HLA-DRB3P79483 266 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 ZNF117Q03924 483 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 ZNF181Q2M3W8 571 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 ZNF322Q6U7Q0 402 aaPredicted RBP1.4□□□□□ -2.19
SCFD1-213ENST00000554776 COMMD7Q86VX2 200 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 LRRC34Q8IZ02 419 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 HAVCR2Q8TDQ0 301 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 GPR119Q8TDV5 335 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 PACRGQ96M98 296 aaPredicted RBP1.4□□□□□ -2.19
SCFD1-213ENST00000554776 OR51B6Q9H340 312 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 MAP1LC3AQ9H492 121 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 C11orf1Q9H5F2 150 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 TUBA4BQ9H853 241 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 SPANXB1Q9NS25 103 aaPredicted RBP1.4□□□□□ -2.19
SCFD1-213ENST00000554776 ZNF337Q9Y3M9 751 aa1.4□□□□□ -2.19
SCFD1-213ENST00000554776 PCYT1BQ9Y5K3 369 aaPredicted RBP1.4□□□□□ -2.19
SCFD1-213ENST00000554776 DSCAMO60469 2012 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 IGHV3-73A0A0B4J1V6 119 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 TRAPPC3O43617 180 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 HLA-DRAP01903 254 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 CD7P09564 240 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 ZNF7P17097 686 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-213ENST00000554776 RPS12P25398 132 aaKnown RBP1.39□□□□□ -2.19
SCFD1-213ENST00000554776 CA7P43166 264 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 REG1BP48304 166 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 CTBP2P56545 445 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 SNAP25P60880 206 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 FABP5Q01469 135 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 MED21Q13503 144 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 RSU1Q15404 277 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 KRTAP6-3Q3LI67 103 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 SPIN4Q56A73 249 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 CCDC121Q6ZUS5 278 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 C2orf91Q6ZV80 131 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 RPS4Y2Q8TD47 263 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 FGF13Q92913 245 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 RNASE6Q93091 150 aaKnown RBP1.39□□□□□ -2.19
SCFD1-213ENST00000554776 SMDT1Q9H4I9 107 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 SLC2A9Q9NRM0 540 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 EMC3Q9P0I2 261 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 MMACHCQ9Y4U1 282 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 POLR3HQ9Y535 204 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-213ENST00000554776 NLRC5Q86WI3 1866 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 THSD7AQ9UPZ6 1657 aa1.39□□□□□ -2.19
SCFD1-213ENST00000554776 ATG2BQ96BY7 2078 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 OTOFQ9HC10 1997 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 TEX50A0A1B0GTY4 177 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 OR11H12B2RN74 326 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 ZNF878C9JN71 531 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 CXCR6O00574 342 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 SSNA1O43805 119 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 HLA-DQB2P05538 268 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 OCM2P0CE71 109 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 CCL3P10147 92 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 NPPCP23582 126 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 CRHBPP24387 322 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 ATP6V0CP27449 155 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 RPL12P30050 165 aaKnown RBP1.38□□□□□ -2.19
SCFD1-213ENST00000554776 CD79BP40259 229 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 CD200P41217 278 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 MGAT3Q09327 533 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 HES1Q14469 280 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 SLC36A2Q495M3 483 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 LGALS9CQ6DKI2 356 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 RASSF6Q6ZTQ3 369 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 DAND5Q8N907 189 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 TMEM161BQ8NDZ6 487 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 OR11H2Q8NH07 326 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 C16orf78Q8WTQ4 265 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 NMNAT3Q96T66 252 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 PARD6GQ9BYG4 376 aaPredicted RBP1.38□□□□□ -2.19
SCFD1-213ENST00000554776 FGFR1OP2Q9NVK5 253 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 BABAM2Q9NXR7 383 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms