RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 TOR1AO14656 332 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 SLC31A2O15432 143 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 ORC5O43913 435 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 RGS11O94810 467 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 GAS8-AS1O95177 125 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 OPN1MWP04001 364 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 MAS1P04201 325 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 UCHL1P09936 223 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 OPN1MW2P0DN77 364 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 OPN1MW3P0DN78 364 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 IGHV3-43DP0DP04 118 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 CD37P11049 281 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 MGMTP16455 207 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 CRHBPP24387 322 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 MAPK3P27361 379 aaPredicted RBP3.27□□□□□ -1.89
VTI1B-203ENST00000554636 BRS3P32247 399 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 VHLP40337 213 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 MNDAP41218 407 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 RAB7AP51149 207 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 ARHGDIBP52566 201 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 ZNF137PP52743 207 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 PRRX1P54821 245 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 RPS25P62851 125 aaKnown RBP3.27□□□□□ -1.89
VTI1B-203ENST00000554636 QRFPP83859 136 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 GABPB1Q06547 395 aaPredicted RBP3.27□□□□□ -1.89
VTI1B-203ENST00000554636 ZNF816Q0VGE8 651 aaPredicted RBP3.27□□□□□ -1.89
VTI1B-203ENST00000554636 UNC119Q13432 240 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 MADCAM1Q13477 382 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 TPBGQ13641 420 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 GPR176Q14439 515 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 RBM39Q14498 530 aaKnown RBP3.27□□□□□ -1.89
VTI1B-203ENST00000554636 SPHARQ15513 63 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 NSUN5P1Q3KNT7 163 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 Q3ZCU0 254 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 ABCA11PQ4W5N1 156 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 ACSM3Q53FZ2 586 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 PDLIM3Q53GG5 364 aaPredicted RBP3.27□□□□□ -1.89
VTI1B-203ENST00000554636 TCTEX1D4Q5JR98 221 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 C1orf100Q5SVJ3 147 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 ATAD3CQ5T2N8 411 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 RAB12Q6IQ22 244 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 C10orf99Q6UWK7 81 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 NDUFA11Q86Y39 141 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 OR8H3Q8N146 312 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 LYG1Q8N1E2 194 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 LINC00311Q8N616 119 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 Q8N6K4 173 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 C5orf56Q8N8D9 126 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 C8orf31Q8N9H6 132 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 ZNF565Q8N9K5 539 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 ZNF439Q8NDP4 499 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 OR52M1Q8NGK5 317 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 OR4K15Q8NH41 348 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 OR56B4Q8NH76 319 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 RFESDQ8TAC1 157 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 MRPL30Q8TCC3 161 aaKnown RBP3.27□□□□□ -1.89
VTI1B-203ENST00000554636 CCDC107Q8WV48 283 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 CAPSLQ8WWF8 208 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 PHYHIPQ92561 330 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 THRSPQ92748 146 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 MYDGFQ969H8 173 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 ARL11Q969Q4 196 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 ST6GALNAC6Q969X2 333 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 CREB3L1Q96BA8 519 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 MRPS24Q96EL2 167 aaKnown RBP3.27□□□□□ -1.89
VTI1B-203ENST00000554636 S100A13Q99584 98 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 GFI1Q99684 422 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 CITED2Q99967 270 aaPredicted RBP3.27□□□□□ -1.89
VTI1B-203ENST00000554636 UQCC2Q9BRT2 126 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 TMED9Q9BVK6 235 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 TM2D1Q9BX74 207 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 ANKRD60Q9BZ19 345 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 KCNK15Q9H427 330 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 DUSP21Q9H596 190 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 SPACA1Q9HBV2 294 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 PCDHB16Q9NRJ7 776 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 ERGIC3Q9Y282 383 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 MOB4Q9Y3A3 225 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 IGHV3-72A0A0B4J1Y9 119 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 IGHV1-3A0A0C4DH29 117 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 ERICH4A6NGS2 130 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 FOXI3A8MTJ6 420 aaPredicted RBP3.26□□□□□ -1.89
VTI1B-203ENST00000554636 TMEM14DPA8MWL7 114 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 MCRIP1C9JLW8 97 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 PTGES3LE9PB15 166 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 G3V4G9 280 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 H0YHG0 523 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 M0QZK8 103 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 CCRL2O00421 344 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 HSD17B6O14756 317 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 SLC22A1O15245 554 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 FGF16O43320 207 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 PDCD6O75340 191 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 CRTAPO75718 401 aaPredicted RBP3.26□□□□□ -1.89
VTI1B-203ENST00000554636 IGKV1D-33P01593 117 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 IGKV1-33P01594 117 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 HBZP02008 142 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 GLAP06280 429 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 UBBP0CG47 229 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 FAM106CPP0CH98 169 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms