RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 FAM185AQ8N0U4 392 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 ZNF561Q8N587 486 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 TMEM86BQ8N661 226 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 SUMF2Q8NBJ7 301 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 ZNF680Q8NEM1 530 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 SDSLQ96GA7 329 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 NRIP2Q9BQI9 281 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 DPCDQ9BVM2 203 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-214ENST00000554604 METTL8Q9H825 291 aaKnown RBP10.16□□□□□ -0.78
SHMT2-214ENST00000554604 OR14J1Q9UGF5 321 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 POMT1Q9Y6A1 747 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 KIAA2026Q5HYC2 2103 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 PKD1L1Q8TDX9 2849 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 TRAV24A0A0B4J272 114 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 A0A1W2PPH5 198 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 A0A1W2PRD5 423 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 A0A1W2PRF3 423 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 A0A1W2PRM7 423 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 DEGS1O15121 323 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 FBP1P09467 338 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 CTXN2P0C2S0 81 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 OMGP23515 440 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 FCGR2CP31995 323 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 HTR2BP41595 481 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 CEBPDP49716 269 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-214ENST00000554604 ZNF345Q14585 488 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 ANKRD55Q3KP44 614 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 NCR3LG1Q68D85 454 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 C11orf87Q6NUJ2 197 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 SLC38A6Q8IZM9 456 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 PIP4P2Q8N4L2 257 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 CD177Q8N6Q3 437 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 Q8N7P7 452 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 OR5D13Q8NGL4 314 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 SGMS2Q8NHU3 365 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 NEK7Q8TDX7 302 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 RSRP1Q9BUV0 290 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 ZNF747Q9BV97 191 aa10.15□□□□□ -0.78
SHMT2-214ENST00000554604 UNKLQ9H9P5 680 aaKnown RBP10.15□□□□□ -0.78
SHMT2-214ENST00000554604 A0A0D9SG52 128 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 C5orf51A6NDU8 294 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 BTBD17A6NE02 478 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 TRDCB7Z8K6 153 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 RNASEK-C17orf49H0YIS7 233 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 NPFFO15130 113 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 DLX1P56177 255 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 HERV-K104P61576 105 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 RPL31P62899 125 aaKnown RBP10.14□□□□□ -0.79
SHMT2-214ENST00000554604 KLRD1Q13241 179 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 ZNF146Q15072 292 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 SPIN3Q5JUX0 258 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 SHISA2Q6UWI4 295 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 ZNF546Q86UE3 836 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 CCDC71LQ8N9Z2 235 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 MRPL30Q8TCC3 161 aaKnown RBP10.14□□□□□ -0.79
SHMT2-214ENST00000554604 PPP1R1CQ8WVI7 109 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 TAF15Q92804 592 aaKnown RBP eCLIP10.14□□□□□ -0.79
SHMT2-214ENST00000554604 GALNT14Q96FL9 552 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 SEC22AQ96IW7 307 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 C2orf50Q96LR7 162 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 MFFQ9GZY8 342 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 HES4Q9HCC6 221 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 TNFSF18Q9UNG2 199 aa10.14□□□□□ -0.79
SHMT2-214ENST00000554604 TRBV6-7A0A0A0MS04 114 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 TEX13DA0A0J9YY54 714 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-214ENST00000554604 hCG_1809904A0A1W2PP81 198 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 A0A1W2PPE2 198 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 A0A1W2PR64 198 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 A0A1W2PRV1 198 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 FAM25EA8MYX2 175 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 OR2F2O95006 317 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 DIRAS3O95661 229 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 KNG1P01042 644 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 PPYP01298 95 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 IGHV4-59P01825 116 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 ZNF44P15621 663 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 MDKP21741 143 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-214ENST00000554604 AADACP22760 399 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 PSMB6P28072 239 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 DUSP1P28562 367 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 IER3P46695 156 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 UBE2E1P51965 193 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 PIGPP57054 158 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 OR2F1Q13607 317 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 EXOSC2Q13868 293 aaKnown RBP10.13□□□□□ -0.79
SHMT2-214ENST00000554604 ABCA11PQ4W5N1 156 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 MOB1BQ7L9L4 216 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 LDLRAD3Q86YD5 345 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 GAPTQ8N292 157 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 KCNRGQ8N5I3 272 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 OR4A4PQ8NGN8 299 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 OR4F5Q8NH21 305 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 THAP6Q8TBB0 222 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 TOMM40LQ969M1 308 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 NAA60Q9H7X0 242 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 C19orf12Q9NSK7 152 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 UBQLN2Q9UHD9 624 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 KCNIP3Q9Y2W7 256 aa10.13□□□□□ -0.79
SHMT2-214ENST00000554604 A0A1B0GUS0 222 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 C13orf42A0A1B0GVH6 325 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms