RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ZNF729A6NN14 1252 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-212ENST00000554486 C17orf98A8MV24 154 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 NPIPB11E5RHQ5 1161 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 FABP7O15540 132 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 ENSAO43768 121 aaKnown RBP5.12□□□□□ -1.59
SCFD1-212ENST00000554486 CD3DP04234 171 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 HEXAP06865 529 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 LIPFP07098 398 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 MSMBP08118 114 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 GSTT2P0CG29 244 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 GSTT2BP0CG30 244 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 ZNF728P0DKX0 622 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 HLA-DMAP28067 261 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 DLX1P56177 255 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 ACTBP60709 375 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 ACTG1P63261 375 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 IFITM3Q01628 133 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 SSBP1Q04837 148 aaKnown RBP5.12□□□□□ -1.59
SCFD1-212ENST00000554486 HERPUD1Q15011 391 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 IGSF11Q5DX21 431 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 PIK3CD-AS1Q5SR53 167 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 UTF1Q5T230 341 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 C6orf183Q5T699 404 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 PRAMEF5Q5TYX0 476 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 TRAT1Q6PIZ9 186 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 ZNF554Q86TJ5 538 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 Q8N7P7 452 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 ZNF565Q8N9K5 539 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 TMEM229BQ8NBD8 167 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 ARL11Q969Q4 196 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 ZNF714Q96N38 554 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 CABLES2Q9BTV7 478 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 CCDC32Q9BV29 185 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 AAMDCQ9H7C9 122 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 TAF9BQ9HBM6 251 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 ZNF286AQ9HBT8 521 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 KCNIP1Q9NZI2 227 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 MSRB1Q9NZV6 116 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 OPN4Q9UHM6 478 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 ZNF107Q9UII5 783 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-212ENST00000554486 ANXA10Q9UJ72 324 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 MGAT4AQ9UM21 535 aa5.12□□□□□ -1.59
SCFD1-212ENST00000554486 SONP18583 2426 aaKnown RBP5.12□□□□□ -1.59
SCFD1-212ENST00000554486 B4DSR2 109 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 ZNF736B4DX44 427 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-212ENST00000554486 M0R1W7 72 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 RHODO00212 210 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 PLA2G10O15496 165 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 SPINT2O43291 252 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 UPK1BO75841 260 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 PMP2P02689 132 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 CD74P04233 296 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 MMP9P14780 707 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 OMGP23515 440 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 HRH1P35367 487 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 KIR2DS4P43632 304 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 RFX2P48378 723 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 TAS2R46P59540 309 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 ARF6P62330 175 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 VAMP2P63027 116 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 PAX8Q06710 450 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 GNMTQ14749 295 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 KIR2DS1Q14954 304 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 CDK10Q15131 360 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 LTC4SQ16873 150 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 HEPN1Q6WQI6 88 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 KIR3DL3Q8N743 410 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 OR5AP2Q8NGF4 316 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 OR4D10Q8NGI6 311 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 OR4C16Q8NGL9 310 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 OR4A4PQ8NGN8 299 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 OR5H2Q8NGV7 314 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 GALMQ96C23 342 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 PARP12Q9H0J9 701 aaKnown RBP5.11□□□□□ -1.59
SCFD1-212ENST00000554486 SIRPDQ9H106 197 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 GAL3ST2Q9H3Q3 398 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 ABCB10Q9NRK6 738 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 IDI2-AS1Q9NZ38 188 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 OR1A1Q9P1Q5 309 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 ONECUT1Q9UBC0 465 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 INSIG2Q9Y5U4 225 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 MXRA5Q9NR99 2828 aa5.11□□□□□ -1.59
SCFD1-212ENST00000554486 TRBV6-7A0A0A0MS04 114 aa5.1□□□□□ -1.59
SCFD1-212ENST00000554486 IGHV3-43A0A0B4J1X8 118 aa5.1□□□□□ -1.59
SCFD1-212ENST00000554486 LINC00854A0A1B0GVQ3 168 aa5.1□□□□□ -1.59
SCFD1-212ENST00000554486 A0A1W2PPH5 198 aa5.1□□□□□ -1.59
SCFD1-212ENST00000554486 SDCBPO00560 298 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-212ENST00000554486 BET1O15155 118 aa5.1□□□□□ -1.59
SCFD1-212ENST00000554486 DIRAS3O95661 229 aa5.1□□□□□ -1.59
SCFD1-212ENST00000554486 RAB3DO95716 219 aa5.1□□□□□ -1.59
SCFD1-212ENST00000554486 RBP4P02753 201 aa5.1□□□□□ -1.59
SCFD1-212ENST00000554486 ZNF735P0CB33 412 aa5.1□□□□□ -1.59
SCFD1-212ENST00000554486 AKAIN1P0CW23 69 aa5.1□□□□□ -1.59
SCFD1-212ENST00000554486 OR5H8P0DN80 308 aa5.1□□□□□ -1.59
SCFD1-212ENST00000554486 IGHV1-8P0DP01 117 aa5.1□□□□□ -1.59
SCFD1-212ENST00000554486 IGHV3-43DP0DP04 118 aa5.1□□□□□ -1.59
SCFD1-212ENST00000554486 TBPP20226 339 aa5.1□□□□□ -1.59
SCFD1-212ENST00000554486 CD34P28906 385 aa5.1□□□□□ -1.59
SCFD1-212ENST00000554486 PPP1CCP36873 323 aaKnown RBP5.1□□□□□ -1.59
SCFD1-212ENST00000554486 OR3A3P47888 321 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms