RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 CEACAM7Q14002 265 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 CRMP1Q14194 572 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 SIX1Q15475 284 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-225ENST00000554214 UBE2V2Q15819 145 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 C3AR1Q16581 482 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 PRSS8Q16651 343 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 TMEM183BQ1AE95 376 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 IAH1Q2TAA2 248 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-225ENST00000554214 C1orf220Q5T0J3 134 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 HENMT1Q5T8I9 393 aaKnown RBP3.59□□□□□ -1.83
ATXN3-225ENST00000554214 C9orf66Q5T8R8 295 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 RPL22L1Q6P5R6 122 aaKnown RBP3.59□□□□□ -1.83
ATXN3-225ENST00000554214 ALKAL2Q6UX46 152 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 TOMM20LQ6UXN7 152 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 NHLRC1Q6VVB1 395 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 B3GLCTQ6Y288 498 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 SIAH3Q8IW03 269 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 KLHDC8AQ8IYD2 350 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 DND1Q8IYX4 353 aaKnown RBP3.59□□□□□ -1.83
ATXN3-225ENST00000554214 SPICQ8N5J4 248 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 CHST4Q8NCG5 386 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 ZNF439Q8NDP4 499 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 LFNGQ8NES3 379 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 B3GNT7Q8NFL0 401 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 OR4K5Q8NGD3 323 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 OR4D11Q8NGI4 311 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 OR51S1Q8NGJ8 323 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 OR1P1Q8NH06 330 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 LGALS14Q8TCE9 139 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 C11orf52Q96A22 123 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 ESAMQ96AP7 390 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 GALMQ96C23 342 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 RAB39BQ96DA2 213 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 CXorf40BQ96DE9 158 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 SEH1LQ96EE3 360 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 ZNF414Q96IQ9 312 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 TEX37Q96LM6 180 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 TNFRSF13CQ96RJ3 184 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 MICU1Q9BPX6 476 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 RBM24Q9BX46 236 aaKnown RBP3.59□□□□□ -1.83
ATXN3-225ENST00000554214 MAP1LC3CQ9BXW4 147 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 DUSP16Q9BY84 665 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 SLC17A9Q9BYT1 436 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 LINC00470Q9BZP3 86 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 NMNAT2Q9BZQ4 307 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 TMEM27Q9HBJ8 222 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 LRTM1Q9HBL6 345 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 ACOT13Q9NPJ3 140 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 CBLN4Q9NTU7 201 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 MRPL16Q9NX20 251 aaKnown RBP3.59□□□□□ -1.83
ATXN3-225ENST00000554214 OR5AC2Q9NZP5 309 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 P2RX2Q9UBL9 471 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 SLC17A4Q9Y2C5 497 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 NSG2Q9Y328 171 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 SNX10Q9Y5X0 201 aa3.59□□□□□ -1.83
ATXN3-225ENST00000554214 MAP1AP78559 2803 aaPredicted RBP3.59□□□□□ -1.84
ATXN3-225ENST00000554214 ANKRD36A6QL64 1941 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 LRP4O75096 1905 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 SHANK1Q9Y566 2161 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 OR5B21A6NL26 309 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 ANKRD30BLA7E2S9 258 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 ZNF705GA8MUZ8 300 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-225ENST00000554214 MFNGO00587 321 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 PLA2G10O15496 165 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 FOXH1O75593 365 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 HBZP02008 142 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 ORM1P02763 201 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 OPN1SWP03999 348 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 SFTPBP07988 381 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 OR5G3P0C626 314 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 PPIAL4GP0DN37 164 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 ZNF19P17023 458 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 USF1P22415 310 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-225ENST00000554214 HIST1H1TP22492 207 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-225ENST00000554214 ADRA1AP35348 466 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 SNCAP37840 140 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 GABRA2P47869 451 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 OR3A4PP47883 348 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 NPBWR1P48145 328 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 TAS2R30P59541 319 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 S100A10P60903 97 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 HIST1H3AP68431 136 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 ACVR1Q04771 509 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 KLRB1Q12918 225 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 MLLT11Q13015 90 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-225ENST00000554214 ELAVL3Q14576 367 aaKnown RBP3.58□□□□□ -1.84
ATXN3-225ENST00000554214 ZNF79Q15937 498 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 TNXAQ16473 311 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 LRRC37A5PQ49AS3 106 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 MS4A13Q5J8X5 152 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 TPTE2P1Q5T6R2 138 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 ZNF660Q6AZW8 331 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-225ENST00000554214 LCN8Q6JVE9 175 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 PRSS54Q6PEW0 395 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 CD200R1LQ6Q8B3 271 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 TBPL2Q6SJ96 375 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 BTNL8Q6UX41 500 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 WDR82Q6UXN9 313 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 Q6ZVQ6 151 aa3.58□□□□□ -1.84
ATXN3-225ENST00000554214 SLC35E3Q7Z769 313 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms