RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 F12P00748 615 aaPredicted RBP11.66□□□□□ -0.54
ABCD4-219ENST00000553745 EFNA4P52798 201 aa11.66□□□□□ -0.54
ABCD4-219ENST00000553745 KRBOX4Q5JUW0 171 aa11.66□□□□□ -0.54
ABCD4-219ENST00000553745 SLC35E4Q6ICL7 350 aa11.66□□□□□ -0.54
ABCD4-219ENST00000553745 LYPD2Q6UXB3 125 aa11.66□□□□□ -0.54
ABCD4-219ENST00000553745 CLEC9AQ6UXN8 241 aa11.66□□□□□ -0.54
ABCD4-219ENST00000553745 IL34Q6ZMJ4 242 aa11.66□□□□□ -0.54
ABCD4-219ENST00000553745 FGFRL1Q8N441 504 aa11.66□□□□□ -0.54
ABCD4-219ENST00000553745 PPP1R35Q8TAP8 253 aa11.66□□□□□ -0.54
ABCD4-219ENST00000553745 ABHD14BQ96IU4 210 aa11.66□□□□□ -0.54
ABCD4-219ENST00000553745 CHODLQ9H9P2 273 aa11.66□□□□□ -0.54
ABCD4-219ENST00000553745 VPS13CQ709C8 3753 aa11.66□□□□□ -0.54
ABCD4-219ENST00000553745 TMEM218A2RU14 115 aa11.65□□□□□ -0.54
ABCD4-219ENST00000553745 TNFRSF13BO14836 293 aaPredicted RBP11.65□□□□□ -0.54
ABCD4-219ENST00000553745 MGST3O14880 152 aa11.65□□□□□ -0.54
ABCD4-219ENST00000553745 APOC3P02656 99 aa11.65□□□□□ -0.54
ABCD4-219ENST00000553745 LPAR6P43657 344 aa11.65□□□□□ -0.54
ABCD4-219ENST00000553745 GLIPR1P48060 266 aa11.65□□□□□ -0.54
ABCD4-219ENST00000553745 PJVKQ0ZLH3 352 aa11.65□□□□□ -0.54
ABCD4-219ENST00000553745 HIST2H2BCQ6DN03 193 aa11.65□□□□□ -0.54
ABCD4-219ENST00000553745 BTNL8Q6UX41 500 aa11.65□□□□□ -0.54
ABCD4-219ENST00000553745 CMTM1Q8IZ96 169 aa11.65□□□□□ -0.54
ABCD4-219ENST00000553745 SPIN2AQ99865 258 aa11.65□□□□□ -0.54
ABCD4-219ENST00000553745 SPIN2BQ9BPZ2 258 aa11.65□□□□□ -0.54
ABCD4-219ENST00000553745 SMIM3Q9BZL3 60 aa11.65□□□□□ -0.54
ABCD4-219ENST00000553745 OR1A1Q9P1Q5 309 aa11.65□□□□□ -0.54
ABCD4-219ENST00000553745 CTSZQ9UBR2 303 aa11.65□□□□□ -0.54
ABCD4-219ENST00000553745 TRAPPC2LQ9UL33 140 aa11.65□□□□□ -0.54
ABCD4-219ENST00000553745 GCN1Q92616 2671 aaKnown RBP11.64□□□□□ -0.55
ABCD4-219ENST00000553745 MEX3AA1L020 520 aaKnown RBP11.64□□□□□ -0.55
ABCD4-219ENST00000553745 PPIHO43447 177 aaKnown RBP11.64□□□□□ -0.55
ABCD4-219ENST00000553745 ADAM20O43506 726 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 FCN3O75636 299 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 IGLV2-14P01704 120 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 IGHV4-39P01824 125 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 VDAC1P21796 283 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 F2RP25116 425 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 ID3Q02535 119 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 PAX5Q02548 391 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 BTN1A1Q13410 526 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 HMGN3Q15651 99 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 C10orf91Q5T1B1 145 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 PXDC1Q5TGL8 231 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 OR10V1Q8NGI7 309 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 GINS3Q9BRX5 216 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 CSMD2Q7Z408 3487 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 FSTL3O95633 263 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 HEXAP06865 529 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 NKX2-1P43699 371 aaPredicted RBP11.64□□□□□ -0.55
ABCD4-219ENST00000553745 EDDM3BP56851 147 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 BLOC1S1P78537 153 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 SRSF3P84103 164 aaKnown RBP11.64□□□□□ -0.55
ABCD4-219ENST00000553745 NHLH2Q02577 135 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 ZNF787Q6DD87 383 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 LYPD6BQ8NI32 183 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 TIMD4Q96H15 378 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 FAM234AQ9H0X4 552 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 PARP11Q9NR21 331 aa11.64□□□□□ -0.55
ABCD4-219ENST00000553745 LOC105371267A0A1B0GV96 52 aa11.63□□□□□ -0.55
ABCD4-219ENST00000553745 FBXO24O75426 580 aa11.63□□□□□ -0.55
ABCD4-219ENST00000553745 SEC11BP0C7V7 166 aa11.63□□□□□ -0.55
ABCD4-219ENST00000553745 KRTAP10-9P60411 292 aa11.63□□□□□ -0.55
ABCD4-219ENST00000553745 GNMTQ14749 295 aa11.63□□□□□ -0.55
ABCD4-219ENST00000553745 ZNF525Q8N782 197 aa11.63□□□□□ -0.55
ABCD4-219ENST00000553745 OR13A1Q8NGR1 328 aa11.63□□□□□ -0.55
ABCD4-219ENST00000553745 KAAG1Q9UBP8 84 aa11.63□□□□□ -0.55
ABCD4-219ENST00000553745 SLC25A10Q9UBX3 287 aaPredicted RBP11.63□□□□□ -0.55
ABCD4-219ENST00000553745 BORCS7-ASMTA0A0B4J1R7 106 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 ODAMA1E959 279 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 TNFSF12O43508 249 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 PITX3O75364 302 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 MED6O75586 246 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 MMP9P14780 707 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 ADCYAP1P18509 176 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 POLR2GP62487 172 aaKnown RBP eCLIP11.62□□□□□ -0.55
ABCD4-219ENST00000553745 EWSR1Q01844 656 aaKnown RBP eCLIP11.62□□□□□ -0.55
ABCD4-219ENST00000553745 ZNF273Q14593 569 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 CXorf66Q5JRM2 361 aaPredicted RBP11.62□□□□□ -0.55
ABCD4-219ENST00000553745 PRR18Q8N4B5 295 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 OR2C3Q8N628 320 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.62□□□□□ -0.55
ABCD4-219ENST00000553745 UBALD1Q8TB05 177 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 MRGPRDQ8TDS7 321 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 RAB1CQ92928 201 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 AKR1E2Q96JD6 320 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 DCTN5Q9BTE1 182 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 IGSF23A1L1A6 192 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 FAM24AA6NFZ4 105 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 DNASE2O00115 360 aaPredicted RBP11.62□□□□□ -0.55
ABCD4-219ENST00000553745 NDUFA2O43678 99 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 ATG12O94817 140 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 SPP1P10451 314 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 SLC25A6P12236 298 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 NDUFB7P17568 137 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 S100GP29377 79 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 GPR6P46095 362 aaPredicted RBP11.62□□□□□ -0.55
ABCD4-219ENST00000553745 CAV2P51636 162 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 AKR1C2P52895 323 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 AKR1C1Q04828 323 aa11.62□□□□□ -0.55
ABCD4-219ENST00000553745 ODF3L1Q8IXM7 274 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms