RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 OR2V2Q96R30 315 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 TMEM204Q9BSN7 226 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 TLNRD1Q9H1K6 362 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 RBKSQ9H477 322 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 PRR33A8MZF0 331 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 MEF2BQ02080 365 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 STPG1Q5TH74 334 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 ZNF788Q6ZQV5 615 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 FGFRL1Q8N441 504 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 GCSAMQ8N6F7 178 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 LRRC75AQ8NAA5 344 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 CCL13Q99616 98 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 F2RL2O00254 374 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 APELAP0DMC3 54 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 OR10J1P30954 320 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 OR8I2Q8N0Y5 310 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 SSX8Q7RTT4 187 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 TAF15Q92804 592 aaKnown RBP eCLIP13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 TMEM54Q969K7 222 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 LOC390937A0A1W2PQ73 354 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 OR2T8A6NH00 312 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 ISLRO14498 428 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 CD8AP01732 235 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 ZNF714Q96N38 554 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 APCSP02743 223 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 MMDQ15546 238 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 OR2D3Q8NGH3 330 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 GPHA2Q96T91 129 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 PAXXQ9BUH6 204 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 UFC1Q9Y3C8 167 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 CHD5Q8TDI0 1954 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 LOC101059948A0A1B0GTJ6 334 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 AHRRA9YTQ3 701 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 FAM90A26D6RGX4 464 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 TIAF1O95411 115 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 TBX6O95947 436 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 POC1AQ8NBT0 407 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 OR8G5Q8NG78 346 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 RAB24Q969Q5 203 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 TMUB1Q9BVT8 246 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 AHCTF1Q8WYP5 2266 aa13.18□□□□□ -0.3
ARHGEF40-202ENST00000553709 KLK2P20151 261 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 TMEM187Q14656 261 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 ZNF441Q8N8Z8 693 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 APCDD1LQ8NCL9 501 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 FAM222BQ8WU58 562 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 RHOVQ96L33 236 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 ZP1P60852 638 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 FAM209BQ5JX69 171 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 PRR7Q8TB68 274 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 DIRC2Q96SL1 478 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 TXNDC17Q9BRA2 123 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 TGFBR3LH3BV60 316 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 PRSS1P07477 247 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 HOXB1P14653 301 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 MDKP21741 143 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 UCP3P55916 312 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 PKIAP61925 76 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 RPS11P62280 158 aaKnown RBP eCLIP13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 MAP1LC3CQ9BXW4 147 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 TRIOBPQ9H2D6 2365 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 NDUFB4O95168 129 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 HIST1H1BP16401 226 aaKnown RBP13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 CEBPDP49716 269 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 ARTNQ5T4W7 220 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 CDCP2Q5VXM1 449 aa13.17□□□□□ -0.3
ARHGEF40-202ENST00000553709 IGKV3D-11A0A0A0MRZ8 115 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 DNASE2O00115 360 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 LINC00114Q6XXX2 140 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 DOLPP1Q86YN1 238 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 FAM216AQ8WUB2 273 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 ITLN1Q8WWA0 313 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 WNT2BQ93097 391 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 STARD4Q96DR4 205 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 MEGF10Q96KG7 1140 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 OR4C12Q96R67 309 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 ZNF716A6NP11 495 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 NKX2-8O15522 239 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 ORM1P02763 201 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 SRP14P37108 136 aaKnown RBP13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 NPBWR2P48146 333 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 UNC119Q13432 240 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 NEUROG3Q9Y4Z2 214 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 WDFY1Q8IWB7 410 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 NLRC5Q86WI3 1866 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 TANC1Q9C0D5 1861 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 SH2D7A6NKC9 451 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 RPL30P62888 115 aaKnown RBP13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 ZNF818PQ6ZRF7 136 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 P2RX4Q99571 388 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 SOSTQ9BQB4 213 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 PTPRDP23468 1912 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 LOC102724200A0A096LPH7 203 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 IGHV3-21A0A0B4J1V1 117 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 TRGC2P03986 189 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 HOXD4P09016 255 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 DANCRP0C864 163 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 HIGD1AQ9Y241 93 aa13.16□□□□□ -0.3
ARHGEF40-202ENST00000553709 HYPMO75409 117 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms