RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 LIN54Q6MZP7 749 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 FAAP20Q6NZ36 180 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 GLDNQ6ZMI3 551 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF66Q6ZN08 573 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 TMED4Q7Z7H5 227 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 SLC25A42Q86VD7 318 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 KIR3DL3Q8N743 410 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF645Q8N7E2 425 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 LINC00469Q8N7U9 141 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 C8orf31Q8N9H6 132 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-202ENST00000553619 LY6G5BQ8NDX9 201 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 OR2AK2Q8NG84 335 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 OR52L2PQ8NGH6 319 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 OR13C8Q8NGS7 320 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 OR8U1Q8NH10 309 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 OR9G1Q8NH87 305 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 OR1L1Q8NH94 360 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 CLDND2Q8NHS1 167 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 COQ8AQ8NI60 647 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 CD300LFQ8TDQ1 290 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 SECTM1Q8WVN6 248 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 TOMM40LQ969M1 308 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 S1PR3Q99500 378 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 PHB2Q99623 299 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 SUCNR1Q9BXA5 334 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 BPESC1Q9GZL8 116 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 MED28Q9H204 178 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 LIME1Q9H400 295 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 C19orf12Q9NSK7 152 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 NUDT15Q9NV35 164 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 CTSZQ9UBR2 303 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 RPUSD1Q9UJJ7 312 aaKnown RBP4.11□□□□□ -1.75
VTI1B-202ENST00000553619 KPTNQ9Y664 436 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 SESN1Q9Y6P5 492 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 SETXQ7Z333 2677 aaKnown RBP4.1□□□□□ -1.75
VTI1B-202ENST00000553619 MALRD1Q5VYJ5 2156 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 DOPEY2Q9Y3R5 2298 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 IGHV3-43A0A0B4J1X8 118 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 A0A0B4J2A0 478 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 IGKV1-6A0A0C4DH72 117 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 A0A1B0GW55 424 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 HMX3A6NHT5 357 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 B4DSR2 109 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 HSD17B6O14756 317 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 MPPED1O15442 326 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 SSNA1O43805 119 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 SNAPC5O75971 98 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 DUS4LO95620 317 aaKnown RBP4.1□□□□□ -1.75
VTI1B-202ENST00000553619 IFNA2P01563 188 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 IFNA21P01568 189 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 DUX4L2P0CJ85 424 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 DUX4L3P0CJ86 424 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 DUX4L4P0CJ87 422 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 DUX4L5P0CJ88 424 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 DUX4L6P0CJ89 424 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 DUX4L7P0CJ90 424 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 IGHV1-8P0DP01 117 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 IGHV3-43DP0DP04 118 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 SELLP14151 372 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 RPA2P15927 270 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 SPNP16150 400 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 PRTN3P24158 256 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 CD34P28906 385 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 GNRHRP30968 328 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 SSTR5P35346 364 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 RBMXP38159 391 aaKnown RBP4.1□□□□□ -1.75
VTI1B-202ENST00000553619 KIR2DS2P43631 304 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 GPR12P47775 334 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 BCAP31P51572 246 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 LGALS4P56470 323 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 PIGPP57054 158 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 LOXL3P58215 753 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 BLOC1S1P78537 153 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 SRPXP78539 464 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 CYCSP99999 105 aaKnown RBP4.1□□□□□ -1.75
VTI1B-202ENST00000553619 LOXL1Q08397 574 aaPredicted RBP4.1□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF273Q14593 569 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 HERPUD1Q15011 391 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 LTC4SQ16873 150 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 TATDN3Q17R31 274 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 DUX4L9Q6RFH8 374 aaPredicted RBP4.1□□□□□ -1.75
VTI1B-202ENST00000553619 LYG2Q86SG7 212 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 ABHD12Q8N2K0 398 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 C12orf45Q8N5I9 185 aaPredicted RBP4.1□□□□□ -1.75
VTI1B-202ENST00000553619 LINC00311Q8N616 119 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF596Q8TC21 504 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF431Q8TF32 576 aaPredicted RBP4.1□□□□□ -1.75
VTI1B-202ENST00000553619 RTN4IP1Q8WWV3 396 aaPredicted RBP4.1□□□□□ -1.75
VTI1B-202ENST00000553619 TMEM186Q96B77 213 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 UPRTQ96BW1 309 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 GALNT14Q96FL9 552 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 RAX2Q96IS3 184 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 ADTRPQ96IZ2 230 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 HSD17B10Q99714 261 aaKnown RBP4.1□□□□□ -1.75
VTI1B-202ENST00000553619 RTBDNQ9BSG5 229 aaPredicted RBP4.1□□□□□ -1.75
VTI1B-202ENST00000553619 ABHD14AQ9BUJ0 271 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 MLST8Q9BVC4 326 aa4.1□□□□□ -1.75
VTI1B-202ENST00000553619 TMEM133Q9H2Q1 129 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms