RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ATP6V0E1O15342 81 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 OR2A4O95047 310 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 HLA-DRB1P01911 266 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 OR2T7P0C7T2 308 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 SLC2A2P11168 524 aaPredicted RBP3.83□□□□□ -1.8
CKAP4-203ENST00000553039 HTR1FP30939 366 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 OPRL1P41146 370 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 KIR2DS2P43631 304 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 MAP2K4P45985 399 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 TPPP2P59282 170 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 GABARAPL2P60520 117 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 DLK1P80370 383 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 AESQ08117 197 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 DIAPH2-AS1Q14236 149 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 ICAM4Q14773 271 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 ZNF146Q15072 292 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 MMDQ15546 238 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 C17orf58Q2M2W7 97 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 RPEL1Q2QD12 228 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 DEFB114Q30KQ6 69 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 ACTBL2Q562R1 376 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 SPIN3Q5JUX0 258 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 RBM48Q5RL73 367 aaKnown RBP3.83□□□□□ -1.8
CKAP4-203ENST00000553039 PVRIGQ6DKI7 326 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 COMMD2Q86X83 199 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 KIR2DL5AQ8N109 375 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 FAM58AQ8N1B3 248 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 BATF2Q8N1L9 274 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 OR8B12Q8NGG6 310 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 OR52B4Q8NGK2 314 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 KIR2DL5BQ8NHK3 375 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 UBALD1Q8TB05 177 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 TEX47Q8TBZ9 253 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 GNPDA2Q8TDQ7 276 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 DYNLRB2Q8TF09 96 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 TMEM18Q96B42 140 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 MOB3AQ96BX8 217 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 ZNF251Q9BRH9 671 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 YTHDF1Q9BYJ9 559 aaKnown RBP3.83□□□□□ -1.8
CKAP4-203ENST00000553039 NCOR1P1Q9H4R4 102 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 EGLN3Q9H6Z9 239 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 VCX3AQ9NNX9 186 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 IDI2-AS1Q9NZ38 188 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 MTCH1Q9NZJ7 389 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 CNOT2Q9NZN8 540 aaKnown RBP3.83□□□□□ -1.8
CKAP4-203ENST00000553039 PEF1Q9UBV8 284 aaKnown RBP3.83□□□□□ -1.8
CKAP4-203ENST00000553039 GPR132Q9UNW8 380 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 NUBP2Q9Y5Y2 271 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 DNAH10Q8IVF4 4471 aa3.83□□□□□ -1.8
CKAP4-203ENST00000553039 A0A087WXM4 84 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 IGHV7-81A0A0B4J1V7 117 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 A0A0B4J203 849 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 SOX14O95416 240 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 SERPINA3P01011 423 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 IGHV3-7P01780 117 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 TRGV3P03979 118 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 SCTP09683 121 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 SMIM18P0DKX4 95 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 AREGP15514 252 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 GZMHP20718 246 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 AADACP22760 399 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 CRHBPP24387 322 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 TNFSF8P32971 234 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 POLR2IP36954 125 aaKnown RBP3.82□□□□□ -1.8
CKAP4-203ENST00000553039 RPL5P46777 297 aaKnown RBP3.82□□□□□ -1.8
CKAP4-203ENST00000553039 OMPP47874 163 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 OR3A1P47881 315 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 REG1BP48304 166 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 GSSP48637 474 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 GTF2A1P52655 376 aaPredicted RBP3.82□□□□□ -1.8
CKAP4-203ENST00000553039 CRISP1P54107 249 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 CXCR4P61073 352 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 ZNF91Q05481 1191 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 TSPAN31Q12999 210 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 PTGES3Q15185 160 aaKnown RBP3.82□□□□□ -1.8
CKAP4-203ENST00000553039 ECSCRQ19T08 205 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 DEFB135Q30KP9 77 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 RPL13AP3Q6NVV1 102 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 CD200R1LQ6Q8B3 271 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 SLC38A6Q8IZM9 456 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 CHST4Q8NCG5 386 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 OR51L1Q8NGJ5 315 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 MRGPRDQ8TDS7 321 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 THEM6Q8WUY1 208 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 FRZBQ92765 325 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 BSCL2Q96G97 398 aaPredicted RBP3.82□□□□□ -1.8
CKAP4-203ENST00000553039 RITA1Q96K30 269 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 SPACA5Q96QH8 159 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 RARRES2Q99969 163 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 FAM192AQ9GZU8 254 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 OR52D1Q9H346 318 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 LINC00574Q9H8X3 128 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 EXOSC4Q9NPD3 245 aaKnown RBP3.82□□□□□ -1.8
CKAP4-203ENST00000553039 SCN3BQ9NY72 215 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 TPRKBQ9Y3C4 175 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 UBR4Q5T4S7 5183 aa3.82□□□□□ -1.8
CKAP4-203ENST00000553039 SMIM31A0A1B0GVY4 71 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 TMEM269A0A1B0GVZ9 245 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 FAM230AA0A1W2PPH8 454 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 SNTNA6NMZ2 147 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms