RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 TPPP2P59282 170 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 RPS16P62249 146 aaKnown RBP8.84□□□□□ -0.99
NEK3-204ENST00000552973 QRFPP83859 136 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 PSG5Q15238 335 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 MED22Q15528 200 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 ACSM6Q6P461 480 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 MS4A15Q8N5U1 240 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 OR5AN1Q8NGI8 311 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 MUC7Q8TAX7 377 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 FBLIM1Q8WUP2 373 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 OR4C12Q96R67 309 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 AGMATQ9BSE5 352 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 MND1Q9BWT6 205 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 LPAR5Q9H1C0 372 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 ZNF355PQ9NSJ1 428 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 FKBP14Q9NWM8 211 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 GAR1Q9NY12 217 aaKnown RBP8.84□□□□□ -0.99
NEK3-204ENST00000552973 TRGV3P03979 118 aa8.83□□□□□ -1
NEK3-204ENST00000552973 CPEP16870 476 aa8.83□□□□□ -1
NEK3-204ENST00000552973 ZBTB25P24278 435 aa8.83□□□□□ -1
NEK3-204ENST00000552973 CRIP2P52943 208 aaPredicted RBP8.83□□□□□ -1
NEK3-204ENST00000552973 HLA-DRB3P79483 266 aa8.83□□□□□ -1
NEK3-204ENST00000552973 PITPNAQ00169 270 aa8.83□□□□□ -1
NEK3-204ENST00000552973 SPHARQ15513 63 aa8.83□□□□□ -1
NEK3-204ENST00000552973 CASC10Q5T4H9 136 aa8.83□□□□□ -1
NEK3-204ENST00000552973 CD200R1LQ6Q8B3 271 aa8.83□□□□□ -1
NEK3-204ENST00000552973 TCTEX1D1Q8N7M0 179 aa8.83□□□□□ -1
NEK3-204ENST00000552973 ZNF383Q8NA42 475 aa8.83□□□□□ -1
NEK3-204ENST00000552973 OR5T1Q8NG75 326 aa8.83□□□□□ -1
NEK3-204ENST00000552973 OR6Q1Q8NGQ2 317 aa8.83□□□□□ -1
NEK3-204ENST00000552973 PHYHIPQ92561 330 aa8.83□□□□□ -1
NEK3-204ENST00000552973 FLYWCH2Q96CP2 140 aaKnown RBP8.83□□□□□ -1
NEK3-204ENST00000552973 RHOVQ96L33 236 aa8.83□□□□□ -1
NEK3-204ENST00000552973 URM1Q9BTM9 101 aaKnown RBP8.83□□□□□ -1
NEK3-204ENST00000552973 RSRP1Q9BUV0 290 aa8.83□□□□□ -1
NEK3-204ENST00000552973 PLGRKTQ9HBL7 147 aa8.83□□□□□ -1
NEK3-204ENST00000552973 AK6Q9Y3D8 172 aaKnown RBP8.83□□□□□ -1
NEK3-204ENST00000552973 HUWE1Q7Z6Z7 4374 aaKnown RBP8.83□□□□□ -1
NEK3-204ENST00000552973 COL7A1Q02388 2944 aa8.82□□□□□ -1
NEK3-204ENST00000552973 ARPC1BO15143 372 aaKnown RBP8.82□□□□□ -1
NEK3-204ENST00000552973 RBBP9O75884 186 aa8.82□□□□□ -1
NEK3-204ENST00000552973 BPNT1O95861 308 aa8.82□□□□□ -1
NEK3-204ENST00000552973 IGKV1-16P04430 117 aa8.82□□□□□ -1
NEK3-204ENST00000552973 UCHL1P09936 223 aa8.82□□□□□ -1
NEK3-204ENST00000552973 OR8U9P0C7N5 309 aa8.82□□□□□ -1
NEK3-204ENST00000552973 ARSBP15848 533 aa8.82□□□□□ -1
NEK3-204ENST00000552973 CD40LGP29965 261 aa8.82□□□□□ -1
NEK3-204ENST00000552973 VEGFCP49767 419 aa8.82□□□□□ -1
NEK3-204ENST00000552973 TMEM50BP56557 158 aa8.82□□□□□ -1
NEK3-204ENST00000552973 CLDN12P56749 244 aa8.82□□□□□ -1
NEK3-204ENST00000552973 FXYD3Q14802 87 aa8.82□□□□□ -1
NEK3-204ENST00000552973 AKIRIN2Q53H80 203 aa8.82□□□□□ -1
NEK3-204ENST00000552973 OGFRL1Q5TC84 451 aaPredicted RBP8.82□□□□□ -1
NEK3-204ENST00000552973 LIPKQ5VXJ0 399 aa8.82□□□□□ -1
NEK3-204ENST00000552973 PYHIN1Q6K0P9 492 aa8.82□□□□□ -1
NEK3-204ENST00000552973 ZNF562Q6V9R5 426 aa8.82□□□□□ -1
NEK3-204ENST00000552973 MOB1BQ7L9L4 216 aa8.82□□□□□ -1
NEK3-204ENST00000552973 OR6M1Q8NGM8 313 aa8.82□□□□□ -1
NEK3-204ENST00000552973 GRPEL2Q8TAA5 225 aa8.82□□□□□ -1
NEK3-204ENST00000552973 ARHGAP5-AS1Q96IT6 56 aa8.82□□□□□ -1
NEK3-204ENST00000552973 GFI1Q99684 422 aa8.82□□□□□ -1
NEK3-204ENST00000552973 RIMS4Q9H426 269 aaPredicted RBP8.82□□□□□ -1
NEK3-204ENST00000552973 Q9N2K0 584 aa8.82□□□□□ -1
NEK3-204ENST00000552973 ZNF221Q9UK13 617 aa8.82□□□□□ -1
NEK3-204ENST00000552973 LSM2Q9Y333 95 aaKnown RBP8.82□□□□□ -1
NEK3-204ENST00000552973 TRBV6-6A0A0A6YYG2 114 aa8.81□□□□□ -1
NEK3-204ENST00000552973 IGKV1-6A0A0C4DH72 117 aa8.81□□□□□ -1
NEK3-204ENST00000552973 ANKRD34BA5PLL1 514 aa8.81□□□□□ -1
NEK3-204ENST00000552973 M0R1X1 148 aa8.81□□□□□ -1
NEK3-204ENST00000552973 ITGB1BP1O14713 200 aa8.81□□□□□ -1
NEK3-204ENST00000552973 SLC25A17O43808 307 aa8.81□□□□□ -1
NEK3-204ENST00000552973 TFAP2AP05549 437 aa8.81□□□□□ -1
NEK3-204ENST00000552973 CD3GP09693 182 aa8.81□□□□□ -1
NEK3-204ENST00000552973 HSMCR30P0CW71 290 aa8.81□□□□□ -1
NEK3-204ENST00000552973 CD37P11049 281 aa8.81□□□□□ -1
NEK3-204ENST00000552973 RPS25P62851 125 aaKnown RBP8.81□□□□□ -1
NEK3-204ENST00000552973 DEFA5Q01523 94 aa8.81□□□□□ -1
NEK3-204ENST00000552973 RNLSQ5VYX0 342 aa8.81□□□□□ -1
NEK3-204ENST00000552973 ZFAND6Q6FIF0 208 aa8.81□□□□□ -1
NEK3-204ENST00000552973 TMEM91Q6ZNR0 172 aa8.81□□□□□ -1
NEK3-204ENST00000552973 FAM89BQ8N5H3 189 aa8.81□□□□□ -1
NEK3-204ENST00000552973 EDARADDQ8WWZ3 215 aa8.81□□□□□ -1
NEK3-204ENST00000552973 UFD1Q92890 307 aa8.81□□□□□ -1
NEK3-204ENST00000552973 TSNAXQ99598 290 aaKnown RBP8.81□□□□□ -1
NEK3-204ENST00000552973 RNF5Q99942 180 aa8.81□□□□□ -1
NEK3-204ENST00000552973 CMSS1Q9BQ75 279 aaKnown RBP8.81□□□□□ -1
NEK3-204ENST00000552973 PECRQ9BY49 303 aa8.81□□□□□ -1
NEK3-204ENST00000552973 ZMAT4Q9H898 229 aa8.81□□□□□ -1
NEK3-204ENST00000552973 RDH8Q9NYR8 311 aa8.81□□□□□ -1
NEK3-204ENST00000552973 FOXI3A8MTJ6 420 aaPredicted RBP8.8□□□□□ -1
NEK3-204ENST00000552973 CNIH1O95406 144 aa8.8□□□□□ -1
NEK3-204ENST00000552973 PJVKQ0ZLH3 352 aa8.8□□□□□ -1
NEK3-204ENST00000552973 PLA2G7Q13093 441 aa8.8□□□□□ -1
NEK3-204ENST00000552973 C2orf76Q3KRA6 126 aa8.8□□□□□ -1
NEK3-204ENST00000552973 PLAC9Q5JTB6 97 aa8.8□□□□□ -1
NEK3-204ENST00000552973 ANKRD13BQ86YJ7 626 aa8.8□□□□□ -1
NEK3-204ENST00000552973 POC5Q8NA72 575 aa8.8□□□□□ -1
NEK3-204ENST00000552973 PTX4Q96A99 478 aa8.8□□□□□ -1
NEK3-204ENST00000552973 ELOVL1Q9BW60 279 aa8.8□□□□□ -1
NEK3-204ENST00000552973 SLA2Q9H6Q3 261 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms