RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 GPR148Q8TDV2 347 aa11.43□□□□□ -0.58
CACNB3-220ENST00000551716 WDR89Q96FK6 387 aaPredicted RBP11.43□□□□□ -0.58
CACNB3-220ENST00000551716 C2orf70A6NJV1 201 aa11.42□□□□□ -0.58
CACNB3-220ENST00000551716 FAM223BA6NKX1 122 aa11.42□□□□□ -0.58
CACNB3-220ENST00000551716 ITGB1BP1O14713 200 aa11.42□□□□□ -0.58
CACNB3-220ENST00000551716 ST8SIA5O15466 376 aa11.42□□□□□ -0.58
CACNB3-220ENST00000551716 TUSC2O75896 110 aa11.42□□□□□ -0.58
CACNB3-220ENST00000551716 IFNA4P05014 189 aa11.42□□□□□ -0.58
CACNB3-220ENST00000551716 CALB2P22676 271 aa11.42□□□□□ -0.58
CACNB3-220ENST00000551716 SOX2P48431 317 aa11.42□□□□□ -0.58
CACNB3-220ENST00000551716 FLOT2Q14254 428 aa11.42□□□□□ -0.58
CACNB3-220ENST00000551716 SLC25A30Q5SVS4 291 aa11.42□□□□□ -0.58
CACNB3-220ENST00000551716 FAM223AQ8IWN6 122 aa11.42□□□□□ -0.58
CACNB3-220ENST00000551716 PARP12Q9H0J9 701 aaKnown RBP11.42□□□□□ -0.58
CACNB3-220ENST00000551716 EXOGQ9Y2C4 368 aaKnown RBP11.42□□□□□ -0.58
CACNB3-220ENST00000551716 A0A1W2PP11 408 aa11.41□□□□□ -0.58
CACNB3-220ENST00000551716 TCRBV3S1A0A5B6 114 aa11.41□□□□□ -0.58
CACNB3-220ENST00000551716 UBE2QL1A1L167 161 aa11.41□□□□□ -0.58
CACNB3-220ENST00000551716 BMPR1BO00238 502 aa11.41□□□□□ -0.58
CACNB3-220ENST00000551716 FASP25445 335 aa11.41□□□□□ -0.58
CACNB3-220ENST00000551716 ATP5G2Q06055 141 aa11.41□□□□□ -0.58
CACNB3-220ENST00000551716 LHFPL3Q86UP9 236 aa11.41□□□□□ -0.58
CACNB3-220ENST00000551716 PDPNQ86YL7 162 aa11.41□□□□□ -0.58
CACNB3-220ENST00000551716 MRPL30Q8TCC3 161 aaKnown RBP11.41□□□□□ -0.58
CACNB3-220ENST00000551716 THTPAQ9BU02 230 aa11.41□□□□□ -0.58
CACNB3-220ENST00000551716 MFFQ9GZY8 342 aa11.41□□□□□ -0.58
CACNB3-220ENST00000551716 GABARAPL1Q9H0R8 117 aa11.41□□□□□ -0.58
CACNB3-220ENST00000551716 MED4Q9NPJ6 270 aa11.41□□□□□ -0.58
CACNB3-220ENST00000551716 IMPAD1Q9NX62 359 aa11.41□□□□□ -0.58
CACNB3-220ENST00000551716 VPS13DQ5THJ4 4388 aa11.41□□□□□ -0.58
CACNB3-220ENST00000551716 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.4□□□□□ -0.58
CACNB3-220ENST00000551716 LGALS9O00182 355 aa11.4□□□□□ -0.58
CACNB3-220ENST00000551716 PRR20EP86478 221 aa11.4□□□□□ -0.58
CACNB3-220ENST00000551716 PRR20CP86479 221 aa11.4□□□□□ -0.58
CACNB3-220ENST00000551716 PRR20DP86480 221 aa11.4□□□□□ -0.58
CACNB3-220ENST00000551716 PRR20BP86481 221 aa11.4□□□□□ -0.58
CACNB3-220ENST00000551716 PRR20AP86496 221 aa11.4□□□□□ -0.58
CACNB3-220ENST00000551716 ZNF45Q02386 682 aa11.4□□□□□ -0.58
CACNB3-220ENST00000551716 RIPK1Q13546 671 aa11.4□□□□□ -0.58
CACNB3-220ENST00000551716 ZNF57Q68EA5 555 aaPredicted RBP11.4□□□□□ -0.58
CACNB3-220ENST00000551716 IL1F10Q8WWZ1 152 aa11.4□□□□□ -0.58
CACNB3-220ENST00000551716 RNF183Q96D59 192 aa11.4□□□□□ -0.58
CACNB3-220ENST00000551716 ZNF184Q99676 751 aaPredicted RBP11.4□□□□□ -0.58
CACNB3-220ENST00000551716 CIB1Q99828 191 aa11.4□□□□□ -0.58
CACNB3-220ENST00000551716 GABARAPL3Q9BY60 117 aa11.4□□□□□ -0.58
CACNB3-220ENST00000551716 SELENOIQ9C0D9 397 aa11.4□□□□□ -0.58
CACNB3-220ENST00000551716 ISG20L2Q9H9L3 353 aaKnown RBP11.4□□□□□ -0.58
CACNB3-220ENST00000551716 KIR2DL5BA0A0G2JN68 375 aa11.39□□□□□ -0.59
CACNB3-220ENST00000551716 KIR2DL5BA0A0G2JPC4 375 aa11.39□□□□□ -0.59
CACNB3-220ENST00000551716 E9PI62 339 aa11.39□□□□□ -0.59
CACNB3-220ENST00000551716 APOA2P02652 100 aa11.39□□□□□ -0.59
CACNB3-220ENST00000551716 IGKV1-16P04430 117 aa11.39□□□□□ -0.59
CACNB3-220ENST00000551716 OR9G9P0C7N8 305 aa11.39□□□□□ -0.59
CACNB3-220ENST00000551716 CBLN1P23435 193 aa11.39□□□□□ -0.59
CACNB3-220ENST00000551716 POLR2IP36954 125 aaKnown RBP11.39□□□□□ -0.59
CACNB3-220ENST00000551716 HMGN3Q15651 99 aa11.39□□□□□ -0.59
CACNB3-220ENST00000551716 KIR2DL5AQ8N109 375 aa11.39□□□□□ -0.59
CACNB3-220ENST00000551716 STPG3Q8N7X2 389 aa11.39□□□□□ -0.59
CACNB3-220ENST00000551716 KIR2DL5BQ8NHK3 375 aa11.39□□□□□ -0.59
CACNB3-220ENST00000551716 EDARADDQ8WWZ3 215 aa11.39□□□□□ -0.59
CACNB3-220ENST00000551716 ABHD14BQ96IU4 210 aa11.39□□□□□ -0.59
CACNB3-220ENST00000551716 OR14A2Q96R54 314 aa11.39□□□□□ -0.59
CACNB3-220ENST00000551716 MUC4Q99102 2169 aa11.39□□□□□ -0.59
CACNB3-220ENST00000551716 CKLFQ9UBR5 152 aa11.39□□□□□ -0.59
CACNB3-220ENST00000551716 H3BNX3 289 aa11.38□□□□□ -0.59
CACNB3-220ENST00000551716 GGCTO75223 188 aaKnown RBP11.38□□□□□ -0.59
CACNB3-220ENST00000551716 PDCD6O75340 191 aa11.38□□□□□ -0.59
CACNB3-220ENST00000551716 SNRPGP62308 76 aaKnown RBP11.38□□□□□ -0.59
CACNB3-220ENST00000551716 SSBP2P81877 361 aaPredicted RBP11.38□□□□□ -0.59
CACNB3-220ENST00000551716 RHOGP84095 191 aa11.38□□□□□ -0.59
CACNB3-220ENST00000551716 EXOSC2Q13868 293 aaKnown RBP11.38□□□□□ -0.59
CACNB3-220ENST00000551716 ATP6AP1Q15904 470 aa11.38□□□□□ -0.59
CACNB3-220ENST00000551716 DEFB135Q30KP9 77 aa11.38□□□□□ -0.59
CACNB3-220ENST00000551716 TM4SF20Q53R12 229 aa11.38□□□□□ -0.59
CACNB3-220ENST00000551716 GLT8D1Q68CQ7 371 aa11.38□□□□□ -0.59
CACNB3-220ENST00000551716 GLIPR1L1Q6UWM5 242 aa11.38□□□□□ -0.59
CACNB3-220ENST00000551716 TMEM61Q8N0U2 210 aa11.38□□□□□ -0.59
CACNB3-220ENST00000551716 ADAD2Q8NCV1 583 aaKnown RBP11.38□□□□□ -0.59
CACNB3-220ENST00000551716 C2CD4CQ8TF44 421 aa11.38□□□□□ -0.59
CACNB3-220ENST00000551716 FAM46BQ96A09 425 aa11.38□□□□□ -0.59
CACNB3-220ENST00000551716 PHB2Q99623 299 aa11.38□□□□□ -0.59
CACNB3-220ENST00000551716 AGMATQ9BSE5 352 aa11.38□□□□□ -0.59
CACNB3-220ENST00000551716 AKIP1Q9NQ31 210 aa11.38□□□□□ -0.59
CACNB3-220ENST00000551716 ZNF230Q9UIE0 474 aaPredicted RBP11.38□□□□□ -0.59
CACNB3-220ENST00000551716 EXOSC1Q9Y3B2 195 aaKnown RBP11.38□□□□□ -0.59
CACNB3-220ENST00000551716 TRAV25A0A0B4J276 109 aa11.37□□□□□ -0.59
CACNB3-220ENST00000551716 A0A1B0GVY2 172 aa11.37□□□□□ -0.59
CACNB3-220ENST00000551716 T-ENOLP0DO92 83 aa11.37□□□□□ -0.59
CACNB3-220ENST00000551716 MGMTP16455 207 aa11.37□□□□□ -0.59
CACNB3-220ENST00000551716 DEFA5Q01523 94 aa11.37□□□□□ -0.59
CACNB3-220ENST00000551716 PJVKQ0ZLH3 352 aa11.37□□□□□ -0.59
CACNB3-220ENST00000551716 RBMS2Q15434 407 aaKnown RBP11.37□□□□□ -0.59
CACNB3-220ENST00000551716 CCDC58Q4VC31 144 aa11.37□□□□□ -0.59
CACNB3-220ENST00000551716 C5orf24Q7Z6I8 188 aa11.37□□□□□ -0.59
CACNB3-220ENST00000551716 GPHB5Q86YW7 130 aa11.37□□□□□ -0.59
CACNB3-220ENST00000551716 CDH26Q8IXH8 852 aa11.37□□□□□ -0.59
CACNB3-220ENST00000551716 SLC38A6Q8IZM9 456 aa11.37□□□□□ -0.59
CACNB3-220ENST00000551716 NECAP1Q8NC96 275 aa11.37□□□□□ -0.59
CACNB3-220ENST00000551716 LGALS12Q96DT0 336 aa11.37□□□□□ -0.59
CACNB3-220ENST00000551716 ZNF221Q9UK13 617 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms