RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 PPP1CCP36873 323 aaKnown RBP8.89□□□□□ -0.99
PTCH1-222ENST00000551425 TCTAP57738 103 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 ZNF45Q02386 682 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 FXYD3Q14802 87 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 PSG5Q15238 335 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 ZNF554Q86TJ5 538 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 GRPEL2Q8TAA5 225 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 TMEM68Q96MH6 324 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 YPEL2Q96QA6 119 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 METTL9Q9H1A3 318 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 TAF9BQ9HBM6 251 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 PLA2G2EQ9NZK7 142 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 MCRIP1C9JLW8 97 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 H0YJW9 148 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 BMPR1BO00238 502 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 SPDEFO95238 335 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 RPSAP08865 295 aaKnown RBP8.88□□□□□ -0.99
PTCH1-222ENST00000551425 GNAO1P09471 354 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 CT45A6P0DMU7 189 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 CT45A5P0DMU8 189 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 CT45A7P0DMV0 189 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 FOLR2P14207 255 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 HTD2P86397 168 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 DEFA5Q01523 94 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 OR51A2Q8NGJ7 313 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 JAM3Q9BX67 310 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 PARP12Q9H0J9 701 aaKnown RBP8.88□□□□□ -0.99
PTCH1-222ENST00000551425 IFI27L2Q9H2X8 130 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 SPACA1Q9HBV2 294 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 MBNL3Q9NUK0 354 aaKnown RBP8.88□□□□□ -0.99
PTCH1-222ENST00000551425 ING4Q9UNL4 249 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 WASHC3Q9Y3C0 194 aa8.88□□□□□ -0.99
PTCH1-222ENST00000551425 C2orf70A6NJV1 201 aa8.87□□□□□ -0.99
PTCH1-222ENST00000551425 UBE2CO00762 179 aa8.87□□□□□ -0.99
PTCH1-222ENST00000551425 DENRO43583 198 aaKnown RBP8.87□□□□□ -0.99
PTCH1-222ENST00000551425 CA11O75493 328 aa8.87□□□□□ -0.99
PTCH1-222ENST00000551425 APOC4P55056 127 aa8.87□□□□□ -0.99
PTCH1-222ENST00000551425 SSBP2P81877 361 aaPredicted RBP8.87□□□□□ -0.99
PTCH1-222ENST00000551425 DEFB135Q30KP9 77 aa8.87□□□□□ -0.99
PTCH1-222ENST00000551425 OR2AK2Q8NG84 335 aa8.87□□□□□ -0.99
PTCH1-222ENST00000551425 OR5AN1Q8NGI8 311 aa8.87□□□□□ -0.99
PTCH1-222ENST00000551425 APH1BQ8WW43 257 aa8.87□□□□□ -0.99
PTCH1-222ENST00000551425 RNF183Q96D59 192 aa8.87□□□□□ -0.99
PTCH1-222ENST00000551425 PELI1Q96FA3 418 aa8.87□□□□□ -0.99
PTCH1-222ENST00000551425 PAK1IP1Q9NWT1 392 aaPredicted RBP8.87□□□□□ -0.99
PTCH1-222ENST00000551425 PIPOXQ9P0Z9 390 aa8.87□□□□□ -0.99
PTCH1-222ENST00000551425 AASSQ9UDR5 926 aa8.87□□□□□ -0.99
PTCH1-222ENST00000551425 RPL36Q9Y3U8 105 aaKnown RBP8.87□□□□□ -0.99
PTCH1-222ENST00000551425 DNAH2Q9P225 4427 aa8.86□□□□□ -0.99
PTCH1-222ENST00000551425 H7C2Y5 167 aa8.86□□□□□ -0.99
PTCH1-222ENST00000551425 RAB29O14966 203 aa8.86□□□□□ -0.99
PTCH1-222ENST00000551425 ZNF780AO75290 641 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-222ENST00000551425 RBMXL2O75526 392 aaKnown RBP8.86□□□□□ -0.99
PTCH1-222ENST00000551425 WBP4O75554 376 aaKnown RBP8.86□□□□□ -0.99
PTCH1-222ENST00000551425 SC5DO75845 299 aa8.86□□□□□ -0.99
PTCH1-222ENST00000551425 GTF2F2P13984 249 aa8.86□□□□□ -0.99
PTCH1-222ENST00000551425 SERPINA2P20848 420 aa8.86□□□□□ -0.99
PTCH1-222ENST00000551425 LGALS7P47929 136 aa8.86□□□□□ -0.99
PTCH1-222ENST00000551425 ANKRD55Q3KP44 614 aa8.86□□□□□ -0.99
PTCH1-222ENST00000551425 DMKNQ6E0U4 476 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-222ENST00000551425 GLDNQ6ZMI3 551 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-222ENST00000551425 GVQW1Q8N7I0 195 aa8.86□□□□□ -0.99
PTCH1-222ENST00000551425 OR52B4Q8NGK2 314 aa8.86□□□□□ -0.99
PTCH1-222ENST00000551425 FBLIM1Q8WUP2 373 aa8.86□□□□□ -0.99
PTCH1-222ENST00000551425 CNBD2Q96M20 576 aa8.86□□□□□ -0.99
PTCH1-222ENST00000551425 TSNAXQ99598 290 aaKnown RBP8.86□□□□□ -0.99
PTCH1-222ENST00000551425 ALG8Q9BVK2 526 aa8.86□□□□□ -0.99
PTCH1-222ENST00000551425 KCNIP1Q9NZI2 227 aa8.86□□□□□ -0.99
PTCH1-222ENST00000551425 DYNC1H1Q14204 4646 aaKnown RBP8.86□□□□□ -0.99
PTCH1-222ENST00000551425 DNAH17Q9UFH2 4485 aa8.86□□□□□ -0.99
PTCH1-222ENST00000551425 IRGMA1A4Y4 181 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 PRSS29PA6NIE9 313 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 J3QRE1 110 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 MAS1P04201 325 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 IFNA4P05014 189 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 EDN2P20800 178 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 MED21Q13503 144 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 RPL39P5Q59GN2 51 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 C6orf141Q5SZD1 244 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 RAB12Q6IQ22 244 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 C5orf24Q7Z6I8 188 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 TMEM61Q8N0U2 210 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 C2CD4CQ8TF44 421 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 MYCBPQ99417 103 aaPredicted RBP8.85□□□□□ -0.99
PTCH1-222ENST00000551425 S100A13Q99584 98 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 SULT4A1Q9BR01 284 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 MFFQ9GZY8 342 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 AMBNQ9NP70 447 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 PLCXD1Q9NUJ7 323 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 MRPS18AQ9NVS2 196 aaKnown RBP8.85□□□□□ -0.99
PTCH1-222ENST00000551425 SCN3BQ9NY72 215 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 COA4Q9NYJ1 87 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 EXOGQ9Y2C4 368 aaKnown RBP8.85□□□□□ -0.99
PTCH1-222ENST00000551425 LRRC42Q9Y546 428 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 DNAH11Q96DT5 4516 aa8.85□□□□□ -0.99
PTCH1-222ENST00000551425 HERC1Q15751 4861 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.84□□□□□ -0.99
PTCH1-222ENST00000551425 KIR2DL5BA0A0G2JN68 375 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 KIR2DL5BA0A0G2JPC4 375 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 A0A1W2PP11 408 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms