RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 PMP2P02689 132 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 HLA-DMAP28067 261 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 FCGR2CP31995 323 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 RCVRNP35243 200 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 RFX2P48378 723 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 TAS2R46P59540 309 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 LSAMPQ13449 338 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 EBI3Q14213 229 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 PYHIN1Q6K0P9 492 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 Q6ZSV7 163 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 C16orf82Q7Z2V1 217 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 LYSMD2Q8IV50 215 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 OR5H2Q8NGV7 314 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 OR4F5Q8NH21 305 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 FCAMRQ8WWV6 532 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 EAF1Q96JC9 268 aaPredicted RBP12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 RBM14Q96PK6 669 aaKnown RBP12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 EHFQ9NZC4 300 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 GAB2Q9UQC2 676 aa12.98□□□□□ -0.33
CHMP1A-209ENST00000550872 FABP12A6NFH5 140 aa12.97□□□□□ -0.33
CHMP1A-209ENST00000550872 M0R1X1 148 aa12.97□□□□□ -0.33
CHMP1A-209ENST00000550872 PROP1O75360 226 aa12.97□□□□□ -0.33
CHMP1A-209ENST00000550872 TUSC2O75896 110 aa12.97□□□□□ -0.33
CHMP1A-209ENST00000550872 MOSP00540 346 aa12.97□□□□□ -0.33
CHMP1A-209ENST00000550872 CT45A6P0DMU7 189 aa12.97□□□□□ -0.33
CHMP1A-209ENST00000550872 CT45A5P0DMU8 189 aa12.97□□□□□ -0.33
CHMP1A-209ENST00000550872 CT45A7P0DMV0 189 aa12.97□□□□□ -0.33
CHMP1A-209ENST00000550872 MRPS10P82664 201 aaKnown RBP12.97□□□□□ -0.33
CHMP1A-209ENST00000550872 GLDNQ6ZMI3 551 aaPredicted RBP12.97□□□□□ -0.33
CHMP1A-209ENST00000550872 DRAXINQ8NBI3 349 aaPredicted RBP12.97□□□□□ -0.33
CHMP1A-209ENST00000550872 OR4C13Q8NGP0 309 aa12.97□□□□□ -0.33
CHMP1A-209ENST00000550872 BEX1Q9HBH7 125 aa12.97□□□□□ -0.33
CHMP1A-209ENST00000550872 SDHAF2Q9NX18 166 aa12.97□□□□□ -0.33
CHMP1A-209ENST00000550872 KLK11Q9UBX7 282 aa12.97□□□□□ -0.33
CHMP1A-209ENST00000550872 IGKV1D-13A0A0B4J2D9 117 aa12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 A6NHS1 94 aa12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 GABARAPH6UMI1 98 aa12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 TSPAN9O75954 239 aa12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 IGKV1-13P0DP09 117 aa12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 MDKP21741 143 aaPredicted RBP12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 AADACP22760 399 aa12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 HRH1P35367 487 aa12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 DGCR2P98153 550 aa12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 AWAT1Q58HT5 328 aa12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 FAM131AQ6UXB0 335 aa12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 C12orf54Q6X4T0 127 aa12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 OVCH2Q7RTZ1 564 aa12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 GIMAP1Q8WWP7 306 aa12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 RBMXL1Q96E39 390 aaKnown RBP12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 RANBP3Q9H6Z4 567 aaPredicted RBP12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 MTFP1Q9UDX5 166 aa12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 MOB4Q9Y3A3 225 aa12.96□□□□□ -0.33
CHMP1A-209ENST00000550872 ANK2Q01484 3957 aa12.96□□□□□ -0.34
CHMP1A-209ENST00000550872 A0A1B0GUS0 222 aa12.95□□□□□ -0.34
CHMP1A-209ENST00000550872 OR5H14A6NHG9 310 aa12.95□□□□□ -0.34
CHMP1A-209ENST00000550872 M0QZK8 103 aa12.95□□□□□ -0.34
CHMP1A-209ENST00000550872 SLC22A5O76082 557 aa12.95□□□□□ -0.34
CHMP1A-209ENST00000550872 MC5RP33032 325 aa12.95□□□□□ -0.34
CHMP1A-209ENST00000550872 ACTBP60709 375 aa12.95□□□□□ -0.34
CHMP1A-209ENST00000550872 BLCAPP62952 87 aa12.95□□□□□ -0.34
CHMP1A-209ENST00000550872 DYRK1AQ13627 763 aa12.95□□□□□ -0.34
CHMP1A-209ENST00000550872 ZNF645Q8N7E2 425 aa12.95□□□□□ -0.34
CHMP1A-209ENST00000550872 SOSTQ9BQB4 213 aa12.95□□□□□ -0.34
CHMP1A-209ENST00000550872 PRSS22Q9GZN4 317 aa12.95□□□□□ -0.34
CHMP1A-209ENST00000550872 C16orf95Q9H693 158 aa12.95□□□□□ -0.34
CHMP1A-209ENST00000550872 CLPSL1A2RUU4 121 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 NCBP2LA6PVI3 153 aaKnown RBP12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 H0YJW9 148 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 H7C2Y5 167 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 CTDSPLO15194 276 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 PPYP01298 95 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 COMPP49747 757 aaPredicted RBP12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 LINC00205P59089 165 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 FXYD4P59646 89 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 DHRS11Q6UWP2 260 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 Q8N6K4 173 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 ZNF383Q8NA42 475 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 OR5AN1Q8NGI8 311 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 OR6F1Q8NGZ6 308 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 LINC01006Q8NI28 216 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 SMIM4Q8WVI0 70 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 SECTM1Q8WVN6 248 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 C5orf30Q96GV9 206 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 ZNF2Q9BSG1 426 aaPredicted RBP12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 SIGLEC9Q9Y336 463 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 MMP24Q9Y5R2 645 aa12.94□□□□□ -0.34
CHMP1A-209ENST00000550872 M0QYG6 137 aa12.93□□□□□ -0.34
CHMP1A-209ENST00000550872 APOA2P02652 100 aa12.93□□□□□ -0.34
CHMP1A-209ENST00000550872 THBS3P49746 956 aa12.93□□□□□ -0.34
CHMP1A-209ENST00000550872 HERV-K104P61576 105 aa12.93□□□□□ -0.34
CHMP1A-209ENST00000550872 TSPAN5P62079 268 aa12.93□□□□□ -0.34
CHMP1A-209ENST00000550872 SSBP1Q04837 148 aaKnown RBP12.93□□□□□ -0.34
CHMP1A-209ENST00000550872 ABCA11PQ4W5N1 156 aa12.93□□□□□ -0.34
CHMP1A-209ENST00000550872 ACTBL2Q562R1 376 aa12.93□□□□□ -0.34
CHMP1A-209ENST00000550872 ARSJQ5FYB0 599 aaPredicted RBP12.93□□□□□ -0.34
CHMP1A-209ENST00000550872 C9orf152Q5JTZ5 239 aa12.93□□□□□ -0.34
CHMP1A-209ENST00000550872 OR6Q1Q8NGQ2 317 aa12.93□□□□□ -0.34
CHMP1A-209ENST00000550872 OR2T6Q8NHC8 308 aa12.93□□□□□ -0.34
CHMP1A-209ENST00000550872 SLC5A7Q9GZV3 580 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms