RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 RIPPLY3P57055 190 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 UBA52P62987 128 aaKnown RBP10.46□□□□□ -0.73
RAB5C-206ENST00000550406 ZNF45Q02386 682 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 EIF4EBP1Q13541 118 aaPredicted RBP10.46□□□□□ -0.73
RAB5C-206ENST00000550406 LY6EQ16553 131 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 ACTBL2Q562R1 376 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 AADACL3Q5VUY0 350 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 CCDC144NLQ6NUI1 221 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 FAM71F2Q6NXP2 309 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 RBMS3Q6XE24 437 aaKnown RBP10.46□□□□□ -0.73
RAB5C-206ENST00000550406 GLDNQ6ZMI3 551 aaPredicted RBP10.46□□□□□ -0.73
RAB5C-206ENST00000550406 MOB3BQ86TA1 216 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 LHFPL1Q86WI0 220 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 TMEM86BQ8N661 226 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 GDPD1Q8N9F7 314 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 ZNF383Q8NA42 475 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 OR4C16Q8NGL9 310 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 OR56B4Q8NH76 319 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 FAM216AQ8WUB2 273 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 SSMEM1Q8WWF3 244 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 MOB3AQ96BX8 217 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 S1PR3Q99500 378 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 CHIAQ9BZP6 476 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 FXYD6Q9H0Q3 95 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 DPAGT1Q9H3H5 408 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 CCL28Q9NRJ3 127 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 ZNF221Q9UK13 617 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 POMT1Q9Y6A1 747 aa10.46□□□□□ -0.73
RAB5C-206ENST00000550406 SETD2Q9BYW2 2564 aaPredicted RBP10.45□□□□□ -0.74
RAB5C-206ENST00000550406 RAB3DO95716 219 aa10.45□□□□□ -0.74
RAB5C-206ENST00000550406 SNRNP70P08621 437 aaKnown RBP10.45□□□□□ -0.74
RAB5C-206ENST00000550406 CSF1P09603 554 aa10.45□□□□□ -0.74
RAB5C-206ENST00000550406 TBPP20226 339 aa10.45□□□□□ -0.74
RAB5C-206ENST00000550406 FXYD4P59646 89 aa10.45□□□□□ -0.74
RAB5C-206ENST00000550406 LSAMPQ13449 338 aa10.45□□□□□ -0.74
RAB5C-206ENST00000550406 EBI3Q14213 229 aa10.45□□□□□ -0.74
RAB5C-206ENST00000550406 RNASE10Q5GAN6 216 aaKnown RBP10.45□□□□□ -0.74
RAB5C-206ENST00000550406 THNSL2Q86YJ6 484 aa10.45□□□□□ -0.74
RAB5C-206ENST00000550406 ZNF645Q8N7E2 425 aa10.45□□□□□ -0.74
RAB5C-206ENST00000550406 DRAXINQ8NBI3 349 aaPredicted RBP10.45□□□□□ -0.74
RAB5C-206ENST00000550406 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.45□□□□□ -0.74
RAB5C-206ENST00000550406 OR6F1Q8NGZ6 308 aa10.45□□□□□ -0.74
RAB5C-206ENST00000550406 OR5R1Q8NH85 324 aa10.45□□□□□ -0.74
RAB5C-206ENST00000550406 SECTM1Q8WVN6 248 aa10.45□□□□□ -0.74
RAB5C-206ENST00000550406 MRGPRFQ96AM1 343 aa10.45□□□□□ -0.74
RAB5C-206ENST00000550406 TAS2R8Q9NYW2 309 aa10.45□□□□□ -0.74
RAB5C-206ENST00000550406 RBM7Q9Y580 266 aaKnown RBP10.45□□□□□ -0.74
RAB5C-206ENST00000550406 NF1P21359 2839 aa10.45□□□□□ -0.74
RAB5C-206ENST00000550406 M0R1X1 148 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 TXNL1O43396 289 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 CHST1O43916 411 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 IFNA2P01563 188 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 RNASE1P07998 156 aaKnown RBP10.44□□□□□ -0.74
RAB5C-206ENST00000550406 AKAIN1P0CW23 69 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 CD1BP29016 333 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 GNRHRP30968 328 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 BRS3P32247 399 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 TSPAN5P62079 268 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 RPL30P62888 115 aaKnown RBP10.44□□□□□ -0.74
RAB5C-206ENST00000550406 ZNF818PQ6ZRF7 136 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 TMEM219Q86XT9 240 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 Q8N6K4 173 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 CAPSLQ8WWF8 208 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 TAF15Q92804 592 aaKnown RBP eCLIP10.44□□□□□ -0.74
RAB5C-206ENST00000550406 RITA1Q96K30 269 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 JMJD8Q96S16 334 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 GPHA2Q96T91 129 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 SLC5A7Q9GZV3 580 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 HRASLSQ9HDD0 168 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 ABCB10Q9NRK6 738 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 VPREB3Q9UKI3 123 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 TCF19Q9Y242 345 aa10.44□□□□□ -0.74
RAB5C-206ENST00000550406 LINC00473A8K010 186 aa10.43□□□□□ -0.74
RAB5C-206ENST00000550406 H0YJW9 148 aa10.43□□□□□ -0.74
RAB5C-206ENST00000550406 GPR137BO60478 399 aa10.43□□□□□ -0.74
RAB5C-206ENST00000550406 IGKV1D-33P01593 117 aa10.43□□□□□ -0.74
RAB5C-206ENST00000550406 IGKV1-33P01594 117 aa10.43□□□□□ -0.74
RAB5C-206ENST00000550406 AMY2AP04746 511 aa10.43□□□□□ -0.74
RAB5C-206ENST00000550406 DUTP33316 252 aaKnown RBP10.43□□□□□ -0.74
RAB5C-206ENST00000550406 PPP5CP53041 499 aa10.43□□□□□ -0.74
RAB5C-206ENST00000550406 BRWD1-AS2P59051 145 aa10.43□□□□□ -0.74
RAB5C-206ENST00000550406 HERV-K104P61576 105 aa10.43□□□□□ -0.74
RAB5C-206ENST00000550406 TMEM17Q86X19 198 aa10.43□□□□□ -0.74
RAB5C-206ENST00000550406 ARRDC1Q8N5I2 433 aa10.43□□□□□ -0.74
RAB5C-206ENST00000550406 OR5AN1Q8NGI8 311 aa10.43□□□□□ -0.74
RAB5C-206ENST00000550406 S100ZQ8WXG8 99 aa10.43□□□□□ -0.74
RAB5C-206ENST00000550406 DDB2Q92466 427 aa10.43□□□□□ -0.74
RAB5C-206ENST00000550406 EAF1Q96JC9 268 aaPredicted RBP10.43□□□□□ -0.74
RAB5C-206ENST00000550406 SLC22A5O76082 557 aa10.42□□□□□ -0.74
RAB5C-206ENST00000550406 IFNA6P05013 189 aa10.42□□□□□ -0.74
RAB5C-206ENST00000550406 IL7P13232 177 aa10.42□□□□□ -0.74
RAB5C-206ENST00000550406 UCP3P55916 312 aa10.42□□□□□ -0.74
RAB5C-206ENST00000550406 HNF4GQ14541 408 aa10.42□□□□□ -0.74
RAB5C-206ENST00000550406 MEF2DQ14814 521 aa10.42□□□□□ -0.74
RAB5C-206ENST00000550406 MSMO1Q15800 293 aa10.42□□□□□ -0.74
RAB5C-206ENST00000550406 C16orf87Q6PH81 154 aa10.42□□□□□ -0.74
RAB5C-206ENST00000550406 TOMM5Q8N4H5 51 aa10.42□□□□□ -0.74
RAB5C-206ENST00000550406 OR51S1Q8NGJ8 323 aa10.42□□□□□ -0.74
RAB5C-206ENST00000550406 OR13C8Q8NGS7 320 aa10.42□□□□□ -0.74
RAB5C-206ENST00000550406 TERB2Q8NHR7 220 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms