RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 HOXA3O43365 443 aaPredicted RBP17.06■□□□□ 0.32
VPS29-206ENST00000549578 CD40LGP29965 261 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 LRRC75BQ2VPJ9 315 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 SCGB2B2Q4G0G5 96 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 MOB3BQ86TA1 216 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 OR8H3Q8N146 312 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 DRAM1Q8N682 238 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 ZNF645Q8N7E2 425 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 DUX5Q96PT3 197 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 CCDC32Q9BV29 185 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 SLC5A7Q9GZV3 580 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 CCL28Q9NRJ3 127 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 TNFRSF19Q9NS68 423 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 LINC00854A0A1B0GVQ3 168 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 VGLL3A8MV65 326 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 H3BUX3 64 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 M0R1X1 148 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 IGLV2-14P01704 120 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 CD24P25063 80 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 IER3P46695 156 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 BAMBIQ13145 260 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 AADACL3Q5VUY0 350 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 FAM71F2Q6NXP2 309 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 DRAXINQ8NBI3 349 aaPredicted RBP17.06■□□□□ 0.32
VPS29-206ENST00000549578 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.06■□□□□ 0.32
VPS29-206ENST00000549578 CFHR4Q92496 578 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 RBMXL1Q96E39 390 aaKnown RBP17.06■□□□□ 0.32
VPS29-206ENST00000549578 HRASLSQ9HDD0 168 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 ESM1Q9NQ30 184 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 MCUBQ9NWR8 336 aa17.06■□□□□ 0.32
VPS29-206ENST00000549578 NF1P21359 2839 aa17.05■□□□□ 0.32
VPS29-206ENST00000549578 IGHV3-72A0A0B4J1Y9 119 aa17.05■□□□□ 0.32
VPS29-206ENST00000549578 DISC1C4P0D8 188 aa17.05■□□□□ 0.32
VPS29-206ENST00000549578 TXNL1O43396 289 aa17.05■□□□□ 0.32
VPS29-206ENST00000549578 ARHGDIBP52566 201 aa17.05■□□□□ 0.32
VPS29-206ENST00000549578 LINC00205P59089 165 aa17.05■□□□□ 0.32
VPS29-206ENST00000549578 LHFPL1Q86WI0 220 aa17.05■□□□□ 0.32
VPS29-206ENST00000549578 OR51S1Q8NGJ8 323 aa17.05■□□□□ 0.32
VPS29-206ENST00000549578 PIFOQ8TCI5 191 aa17.05■□□□□ 0.32
VPS29-206ENST00000549578 NABP2Q9BQ15 211 aa17.05■□□□□ 0.32
VPS29-206ENST00000549578 ABCB10Q9NRK6 738 aa17.05■□□□□ 0.32
VPS29-206ENST00000549578 GAB2Q9UQC2 676 aa17.05■□□□□ 0.32
VPS29-206ENST00000549578 AANATQ16613 207 aa17.04■□□□□ 0.32
VPS29-206ENST00000549578 SSMEM1Q8WWF3 244 aa17.04■□□□□ 0.32
VPS29-206ENST00000549578 JMJD1CQ15652 2540 aa17.04■□□□□ 0.32
VPS29-206ENST00000549578 DNAJC9-AS1A6NH13 148 aa17.03■□□□□ 0.32
VPS29-206ENST00000549578 CT45A6P0DMU7 189 aa17.03■□□□□ 0.32
VPS29-206ENST00000549578 CT45A5P0DMU8 189 aa17.03■□□□□ 0.32
VPS29-206ENST00000549578 CT45A7P0DMV0 189 aa17.03■□□□□ 0.32
VPS29-206ENST00000549578 BRS3P32247 399 aa17.03■□□□□ 0.32
VPS29-206ENST00000549578 FAUP35544 74 aaKnown RBP17.03■□□□□ 0.32
VPS29-206ENST00000549578 DYNLT3P51808 116 aa17.03■□□□□ 0.32
VPS29-206ENST00000549578 HILS1P60008 231 aa17.03■□□□□ 0.32
VPS29-206ENST00000549578 FBLN7Q53RD9 439 aa17.03■□□□□ 0.32
VPS29-206ENST00000549578 GLDNQ6ZMI3 551 aaPredicted RBP17.03■□□□□ 0.32
VPS29-206ENST00000549578 TERB2Q8NHR7 220 aa17.03■□□□□ 0.32
VPS29-206ENST00000549578 GPHA2Q96T91 129 aa17.03■□□□□ 0.32
VPS29-206ENST00000549578 SLC22A5O76082 557 aa17.02■□□□□ 0.32
VPS29-206ENST00000549578 GNRHRP30968 328 aa17.02■□□□□ 0.32
VPS29-206ENST00000549578 SLC9A3R2Q15599 337 aa17.02■□□□□ 0.32
VPS29-206ENST00000549578 LY6EQ16553 131 aa17.02■□□□□ 0.32
VPS29-206ENST00000549578 ZNF818PQ6ZRF7 136 aa17.02■□□□□ 0.32
VPS29-206ENST00000549578 ZDHHC22Q8N966 263 aa17.02■□□□□ 0.32
VPS29-206ENST00000549578 CAPSLQ8WWF8 208 aa17.02■□□□□ 0.32
VPS29-206ENST00000549578 MRGPRFQ96AM1 343 aa17.02■□□□□ 0.32
VPS29-206ENST00000549578 DPAGT1Q9H3H5 408 aa17.02■□□□□ 0.32
VPS29-206ENST00000549578 TNFSF12O43508 249 aa17.01■□□□□ 0.31
VPS29-206ENST00000549578 TCF21O43680 179 aa17.01■□□□□ 0.31
VPS29-206ENST00000549578 VENTXO95231 258 aa17.01■□□□□ 0.31
VPS29-206ENST00000549578 SNRNP70P08621 437 aaKnown RBP17.01■□□□□ 0.31
VPS29-206ENST00000549578 HABP2Q14520 560 aaPredicted RBP17.01■□□□□ 0.31
VPS29-206ENST00000549578 ZNF383Q8NA42 475 aa17.01■□□□□ 0.31
VPS29-206ENST00000549578 DEDD2Q8WXF8 326 aa17.01■□□□□ 0.31
VPS29-206ENST00000549578 PRRT1Q99946 306 aa17.01■□□□□ 0.31
VPS29-206ENST00000549578 SLC2A8Q9NY64 477 aa17.01■□□□□ 0.31
VPS29-206ENST00000549578 BTBD17A6NE02 478 aa17.01■□□□□ 0.31
VPS29-206ENST00000549578 SRSF2Q01130 221 aaKnown RBP17.01■□□□□ 0.31
VPS29-206ENST00000549578 IDO2Q6ZQW0 420 aa17.01■□□□□ 0.31
VPS29-206ENST00000549578 OR13C8Q8NGS7 320 aa17.01■□□□□ 0.31
VPS29-206ENST00000549578 OR5R1Q8NH85 324 aa17.01■□□□□ 0.31
VPS29-206ENST00000549578 TSC22D3Q99576 134 aa17.01■□□□□ 0.31
VPS29-206ENST00000549578 CHIAQ9BZP6 476 aa17.01■□□□□ 0.31
VPS29-206ENST00000549578 SCP2D1Q9UJQ7 156 aa17.01■□□□□ 0.31
VPS29-206ENST00000549578 FAM90A9PA6NNJ1 464 aa17■□□□□ 0.31
VPS29-206ENST00000549578 UPK1BO75841 260 aa17■□□□□ 0.31
VPS29-206ENST00000549578 IGKV1D-33P01593 117 aa17■□□□□ 0.31
VPS29-206ENST00000549578 IGKV1-33P01594 117 aa17■□□□□ 0.31
VPS29-206ENST00000549578 PGAM2P15259 253 aa17■□□□□ 0.31
VPS29-206ENST00000549578 DUTP33316 252 aaKnown RBP17■□□□□ 0.31
VPS29-206ENST00000549578 UCP3P55916 312 aa17■□□□□ 0.31
VPS29-206ENST00000549578 EIF4EBP1Q13541 118 aaPredicted RBP17■□□□□ 0.31
VPS29-206ENST00000549578 MSMO1Q15800 293 aa17■□□□□ 0.31
VPS29-206ENST00000549578 MARCH1Q8TCQ1 289 aa17■□□□□ 0.31
VPS29-206ENST00000549578 VPREB3Q9UKI3 123 aa17■□□□□ 0.31
VPS29-206ENST00000549578 TCF19Q9Y242 345 aa17■□□□□ 0.31
VPS29-206ENST00000549578 POMT1Q9Y6A1 747 aa17■□□□□ 0.31
VPS29-206ENST00000549578 LINC00473A8K010 186 aa16.99■□□□□ 0.31
VPS29-206ENST00000549578 H0YJW9 148 aa16.99■□□□□ 0.31
VPS29-206ENST00000549578 PLA2G10O15496 165 aa16.99■□□□□ 0.31
VPS29-206ENST00000549578 IFNA2P01563 188 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms