RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 SUCNR1Q9BXA5 334 aa6.61□□□□□ -1.35
DEPDC4-207ENST00000549249 NAA60Q9H7X0 242 aa6.61□□□□□ -1.35
DEPDC4-207ENST00000549249 GPN1Q9HCN4 374 aaPredicted RBP6.61□□□□□ -1.35
DEPDC4-207ENST00000549249 KCNS2Q9ULS6 477 aa6.61□□□□□ -1.35
DEPDC4-207ENST00000549249 RBM7Q9Y580 266 aaKnown RBP6.61□□□□□ -1.35
DEPDC4-207ENST00000549249 SESN1Q9Y6P5 492 aa6.61□□□□□ -1.35
DEPDC4-207ENST00000549249 HIVEP1P15822 2718 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 A0A087X0M5 115 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 IGHV2-70DA0A0C4DH43 119 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 A0A1B0GX30 115 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 A8MV72 311 aaPredicted RBP6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 MPPED1O15442 326 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 ENSAO43768 121 aaKnown RBP6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 PGLYRP1O75594 196 aaPredicted RBP6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 RGS11O94810 467 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 DUS4LO95620 317 aaKnown RBP6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 IGLV1-40P01703 118 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 RBP4P02753 201 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 OR5AC1P0C628 307 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 TRAPPC2P0DI81 140 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 TRAPPC2BP0DI82 140 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 SULT1A3P0DMM9 295 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 SULT1A4P0DMN0 295 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 CXCL3P19876 107 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 CD34P28906 385 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 LINC00205P59089 165 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 RPL30P62888 115 aaKnown RBP6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 TMEM187Q14656 261 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 MSMO1Q15800 293 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 SP6Q3SY56 376 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 Q3ZCU0 254 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 ABCA11PQ4W5N1 156 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 RPL39P5Q59GN2 51 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 CD276Q5ZPR3 534 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 HCP5Q6MZN7 132 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 BTNL3Q6UXE8 466 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 C12orf45Q8N5I9 185 aaPredicted RBP6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 CCDC71LQ8N9Z2 235 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 OR2AK2Q8NG84 335 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 LHFPL5Q8TAF8 219 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 FAM216AQ8WUB2 273 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 MITD1Q8WV92 249 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 AKR1E2Q96JD6 320 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 ZNF251Q9BRH9 671 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 TMEM133Q9H2Q1 129 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 MMP26Q9NRE1 261 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 SDHAF2Q9NX18 166 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 ONECUT1Q9UBC0 465 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 POLR3KQ9Y2Y1 108 aaPredicted RBP6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 TACC2O95359 2948 aa6.6□□□□□ -1.35
DEPDC4-207ENST00000549249 SAA2-SAA4A0A096LPE2 208 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 TEX13DA0A0J9YY54 714 aaPredicted RBP6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 C3orf85A0A1B0GTC6 90 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 DBX1A6NMT0 343 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 LINC00473A8K010 186 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 J3QR06 171 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 M0R1W7 72 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 SSNA1O43805 119 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 FOXH1O75593 365 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 IFNA2P01563 188 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 SAA2P0DJI9 122 aaPredicted RBP6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 MMP9P14780 707 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 SLC25A16P16260 332 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 GPR12P47775 334 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 RAB7AP51149 207 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 ARF6P62330 175 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 KLRD1Q13241 179 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 Q5PR19 223 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 SGPP2Q8IWX5 399 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 LINC00311Q8N616 119 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 KIR3DL3Q8N743 410 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 C8orf31Q8N9H6 132 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 ZBTB34Q8NCN2 500 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 OR51H1Q8NH63 302 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 GLYATL2Q8WU03 294 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 TNFRSF14Q92956 283 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 MSI2Q96DH6 328 aaKnown RBP6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 WDR89Q96FK6 387 aaPredicted RBP6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 ST6GAL2Q96JF0 529 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 SIRPDQ9H106 197 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 MED28Q9H204 178 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 LPAR2Q9HBW0 351 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 SIRT7Q9NRC8 400 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 MGAT4CQ9UBM8 478 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 GAB2Q9UQC2 676 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 CSMD1Q96PZ7 3565 aa6.59□□□□□ -1.35
DEPDC4-207ENST00000549249 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.59□□□□□ -1.36
DEPDC4-207ENST00000549249 PDZD2O15018 2839 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 IGHV2-26A0A0B4J1V2 119 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 A0A0B4J2A0 478 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 KRTAP4-8A0A0G2JLE6 195 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 A0A1W2PPH5 198 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 H0Y980 276 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 CCSO14618 274 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 GOSR2O14653 212 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 PAX4O43316 350 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 ADAP1O75689 374 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 SLC22A5O76082 557 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 SIX6O95475 246 aa6.58□□□□□ -1.36
DEPDC4-207ENST00000549249 IGKV1-39P01597 117 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms