RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 TNFSF12O43508 249 aa23.39■■□□□ 1.34
BRF1-213ENST00000548421 VSIG10L2P0DP72 767 aa23.39■■□□□ 1.34
BRF1-213ENST00000548421 ZNF137PP52743 207 aa23.39■■□□□ 1.34
BRF1-213ENST00000548421 RPL39P5Q59GN2 51 aa23.39■■□□□ 1.34
BRF1-213ENST00000548421 Q6ZNX1 250 aa23.39■■□□□ 1.34
BRF1-213ENST00000548421 SVEP1Q4LDE5 3571 aa23.39■■□□□ 1.33
BRF1-213ENST00000548421 TEX15Q9BXT5 2789 aa23.38■■□□□ 1.33
BRF1-213ENST00000548421 BUB1B-PAK6H3BSN5 160 aa23.38■■□□□ 1.33
BRF1-213ENST00000548421 PRAF2O60831 178 aa23.38■■□□□ 1.33
BRF1-213ENST00000548421 OR4E1P0C645 316 aa23.38■■□□□ 1.33
BRF1-213ENST00000548421 DHODHQ02127 395 aa23.38■■□□□ 1.33
BRF1-213ENST00000548421 ZNF251Q9BRH9 671 aa23.38■■□□□ 1.33
BRF1-213ENST00000548421 CRYM-AS1A6NIL9 109 aa23.37■■□□□ 1.33
BRF1-213ENST00000548421 MPPED1O15442 326 aa23.37■■□□□ 1.33
BRF1-213ENST00000548421 PGLYRP1O75594 196 aaPredicted RBP23.37■■□□□ 1.33
BRF1-213ENST00000548421 IL5P05113 134 aa23.37■■□□□ 1.33
BRF1-213ENST00000548421 EIF4EBP1Q13541 118 aaPredicted RBP23.37■■□□□ 1.33
BRF1-213ENST00000548421 TATDN3Q17R31 274 aa23.37■■□□□ 1.33
BRF1-213ENST00000548421 C4orf46Q504U0 113 aa23.37■■□□□ 1.33
BRF1-213ENST00000548421 FAM71F2Q6NXP2 309 aa23.37■■□□□ 1.33
BRF1-213ENST00000548421 ZNF833PQ6ZTB9 187 aa23.37■■□□□ 1.33
BRF1-213ENST00000548421 TBC1D26Q86UD7 250 aa23.37■■□□□ 1.33
BRF1-213ENST00000548421 SGPP2Q8IWX5 399 aa23.37■■□□□ 1.33
BRF1-213ENST00000548421 GPHA2Q96T91 129 aa23.37■■□□□ 1.33
BRF1-213ENST00000548421 TEX13DA0A0J9YY54 714 aaPredicted RBP23.36■■□□□ 1.33
BRF1-213ENST00000548421 PROP1O75360 226 aa23.36■■□□□ 1.33
BRF1-213ENST00000548421 PPP1R1AQ13522 171 aa23.36■■□□□ 1.33
BRF1-213ENST00000548421 GLDNQ6ZMI3 551 aaPredicted RBP23.36■■□□□ 1.33
BRF1-213ENST00000548421 C1orf229Q6ZS94 237 aaPredicted RBP23.36■■□□□ 1.33
BRF1-213ENST00000548421 ST6GALNAC6Q969X2 333 aa23.36■■□□□ 1.33
BRF1-213ENST00000548421 HSD17B10Q99714 261 aaKnown RBP23.36■■□□□ 1.33
BRF1-213ENST00000548421 NAA60Q9H7X0 242 aa23.36■■□□□ 1.33
BRF1-213ENST00000548421 CENPVL3A0A0U1RRI6 287 aa23.36■■□□□ 1.33
BRF1-213ENST00000548421 M0R1X1 148 aa23.36■■□□□ 1.33
BRF1-213ENST00000548421 HTR1DP28221 377 aa23.36■■□□□ 1.33
BRF1-213ENST00000548421 C11orf88Q6PI97 169 aa23.36■■□□□ 1.33
BRF1-213ENST00000548421 ZNF66Q6ZN08 573 aa23.36■■□□□ 1.33
BRF1-213ENST00000548421 A0A0B4J293 547 aa23.35■■□□□ 1.33
BRF1-213ENST00000548421 RNF212BA8MTL3 300 aa23.35■■□□□ 1.33
BRF1-213ENST00000548421 HLA-AP01891 365 aaKnown RBP23.35■■□□□ 1.33
BRF1-213ENST00000548421 VAMP1P23763 118 aa23.35■■□□□ 1.33
BRF1-213ENST00000548421 SUPT4H1P63272 117 aaKnown RBP23.35■■□□□ 1.33
BRF1-213ENST00000548421 CELSR1Q9NYQ6 3014 aa23.35■■□□□ 1.33
BRF1-213ENST00000548421 TRAV40A0A0B4J280 105 aa23.34■■□□□ 1.33
BRF1-213ENST00000548421 A0A1W2PRD5 423 aa23.34■■□□□ 1.33
BRF1-213ENST00000548421 A0A1W2PRF3 423 aa23.34■■□□□ 1.33
BRF1-213ENST00000548421 A0A1W2PRM7 423 aa23.34■■□□□ 1.33
BRF1-213ENST00000548421 LEUTXA8MZ59 168 aa23.34■■□□□ 1.33
BRF1-213ENST00000548421 AVPP01185 164 aa23.34■■□□□ 1.33
BRF1-213ENST00000548421 DUTP33316 252 aaKnown RBP23.34■■□□□ 1.33
BRF1-213ENST00000548421 LGALS4P56470 323 aa23.34■■□□□ 1.33
BRF1-213ENST00000548421 CATR1Q13166 79 aa23.34■■□□□ 1.33
BRF1-213ENST00000548421 DHRS2Q13268 280 aa23.34■■□□□ 1.33
BRF1-213ENST00000548421 GPR157Q5UAW9 335 aa23.34■■□□□ 1.33
BRF1-213ENST00000548421 KCTD9Q7L273 389 aa23.34■■□□□ 1.33
BRF1-213ENST00000548421 OR51H1Q8NH63 302 aa23.34■■□□□ 1.33
BRF1-213ENST00000548421 SEC22CQ9BRL7 303 aa23.34■■□□□ 1.33
BRF1-213ENST00000548421 GPN1Q9HCN4 374 aaPredicted RBP23.34■■□□□ 1.33
BRF1-213ENST00000548421 DPM3Q9P2X0 92 aa23.34■■□□□ 1.33
BRF1-213ENST00000548421 TBL2Q9Y4P3 447 aaKnown RBP23.34■■□□□ 1.33
BRF1-213ENST00000548421 LY6LH3BQJ8 138 aa23.33■■□□□ 1.33
BRF1-213ENST00000548421 F2RP25116 425 aa23.33■■□□□ 1.33
BRF1-213ENST00000548421 CEACAM3P40198 252 aa23.33■■□□□ 1.33
BRF1-213ENST00000548421 MINOS1Q5TGZ0 78 aa23.33■■□□□ 1.33
BRF1-213ENST00000548421 LYG2Q86SG7 212 aa23.33■■□□□ 1.33
BRF1-213ENST00000548421 LIN7CQ9NUP9 197 aaKnown RBP23.33■■□□□ 1.33
BRF1-213ENST00000548421 KCNIP3Q9Y2W7 256 aa23.33■■□□□ 1.33
BRF1-213ENST00000548421 MINOS1-NBL1R4GNA1 71 aa23.33■■□□□ 1.33
BRF1-213ENST00000548421 IGHV1-69DA0A0B4J2H0 117 aa23.32■■□□□ 1.32
BRF1-213ENST00000548421 C3orf85A0A1B0GTC6 90 aa23.32■■□□□ 1.32
BRF1-213ENST00000548421 C9orf170A2RU37 121 aa23.32■■□□□ 1.32
BRF1-213ENST00000548421 SFT2D2O95562 160 aa23.32■■□□□ 1.32
BRF1-213ENST00000548421 IGHV1-69P01742 117 aa23.32■■□□□ 1.32
BRF1-213ENST00000548421 DIAPH2-AS1Q14236 149 aa23.32■■□□□ 1.32
BRF1-213ENST00000548421 MIDNQ504T8 468 aa23.32■■□□□ 1.32
BRF1-213ENST00000548421 TGIF2LXQ8IUE1 241 aa23.32■■□□□ 1.32
BRF1-213ENST00000548421 DRAXINQ8NBI3 349 aaPredicted RBP23.32■■□□□ 1.32
BRF1-213ENST00000548421 OR52B4Q8NGK2 314 aa23.32■■□□□ 1.32
BRF1-213ENST00000548421 RPEQ96AT9 228 aa23.32■■□□□ 1.32
BRF1-213ENST00000548421 GALNT14Q96FL9 552 aa23.32■■□□□ 1.32
BRF1-213ENST00000548421 ALG5Q9Y673 324 aa23.32■■□□□ 1.32
BRF1-213ENST00000548421 C7orf66A4D0T2 115 aa23.31■■□□□ 1.32
BRF1-213ENST00000548421 LINC00473A8K010 186 aa23.31■■□□□ 1.32
BRF1-213ENST00000548421 NPFFO15130 113 aa23.31■■□□□ 1.32
BRF1-213ENST00000548421 RPL30P62888 115 aaKnown RBP23.31■■□□□ 1.32
BRF1-213ENST00000548421 LDLRAD2Q5SZI1 272 aa23.31■■□□□ 1.32
BRF1-213ENST00000548421 SPNS3Q6ZMD2 512 aa23.31■■□□□ 1.32
BRF1-213ENST00000548421 TCTEX1D2Q8WW35 142 aa23.31■■□□□ 1.32
BRF1-213ENST00000548421 ADTRPQ96IZ2 230 aa23.31■■□□□ 1.32
BRF1-213ENST00000548421 C18orf12Q96KH6 178 aa23.31■■□□□ 1.32
BRF1-213ENST00000548421 A0A0A6YYJ9 748 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 H0Y980 276 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 TXNL1O43396 289 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 CD5LO43866 347 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 B3GALNT1O75752 331 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 IFNA2P01563 188 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 OR5AC1P0C628 307 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 ANXA3P12429 323 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 REG1BP48304 166 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 THBS3P49746 956 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms