RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 STPG2Q8N412 459 aa13.75□□□□□ -0.21
CHMP1A-204ENST00000547687 OR2C3Q8N628 320 aa13.75□□□□□ -0.21
CHMP1A-204ENST00000547687 GCSAMQ8N6F7 178 aa13.75□□□□□ -0.21
CHMP1A-204ENST00000547687 OR52L2PQ8NGH6 319 aa13.75□□□□□ -0.21
CHMP1A-204ENST00000547687 MRGPRDQ8TDS7 321 aa13.75□□□□□ -0.21
CHMP1A-204ENST00000547687 GPR146Q96CH1 333 aa13.75□□□□□ -0.21
CHMP1A-204ENST00000547687 SAT2Q96F10 170 aaPredicted RBP13.75□□□□□ -0.21
CHMP1A-204ENST00000547687 MAGT1Q9H0U3 335 aa13.75□□□□□ -0.21
CHMP1A-204ENST00000547687 FAM24AA6NFZ4 105 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 SSSCA1O60232 199 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 ZNF16P17020 682 aaPredicted RBP13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 VAMP2P63027 116 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 CCL8P80075 99 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 SPNS3Q6ZMD2 512 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 FAM90A1Q86YD7 464 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 DRAM1Q8N682 238 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 BPIFCQ8NFQ6 507 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 ARL11Q969Q4 196 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 FOXC2Q99958 501 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 AIFM2Q9BRQ8 373 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 ARV1Q9H2C2 271 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 GCM1Q9NP62 436 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 RNF115Q9Y4L5 304 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 DYSFO75923 2080 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 NIPBLQ6KC79 2804 aaeCLIP13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 C17orf100A8MU93 164 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 TNFSF4P23510 183 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 SULT1A2P50226 295 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 EWSR1Q01844 656 aaKnown RBP eCLIP13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 UQCC3Q6UW78 93 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 TPRX1Q8N7U7 411 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 SMIM8Q96KF7 97 aa13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 LIN7CQ9NUP9 197 aaKnown RBP13.74□□□□□ -0.21
CHMP1A-204ENST00000547687 ARFGEF3Q5TH69 2177 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 A0A0G2JRQ6 117 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 A0A1B0GU03 582 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 NUDT19A8MXV4 375 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 SLC25A6P12236 298 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 EPHA1P21709 976 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 CAV2P51636 162 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 MST1LQ2TV78 715 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 OR13A1Q8NGR1 328 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 RNASE11Q8TAA1 199 aaKnown RBP13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 CCL19Q99731 98 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 TOLLIPQ9H0E2 274 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 CISD1Q9NZ45 108 aaKnown RBP13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 PLA2G2EQ9NZK7 142 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 RNF150Q9ULK6 438 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 KIAA2026Q5HYC2 2103 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 IGKV1D-17A0A075B6S4 117 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 RNF212BA8MTL3 300 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 PITX3O75364 302 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 MED6O75586 246 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 LHBP01229 141 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 IGKV1-39P01597 117 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 IGKV1D-39P04432 117 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 ADH4P08319 380 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 MMP9P14780 707 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 APOBEC3AP31941 199 aaPredicted RBP13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 ZNF585BQ52M93 769 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 ZNF645Q8N7E2 425 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 ZBTB34Q8NCN2 500 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 WFDC11Q8NEX6 87 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 LSM10Q969L4 123 aaKnown RBP13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 SLC25A31Q9H0C2 315 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 SEBOXQ9HB31 216 aaPredicted RBP13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 MMP26Q9NRE1 261 aa13.73□□□□□ -0.21
CHMP1A-204ENST00000547687 IGHV3OR15-7A0A075B7D8 119 aa13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 IGSF23A1L1A6 192 aa13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 WRBO00258 174 aa13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 CHST1O43916 411 aa13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 ZNF737O75373 536 aa13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 NXPH3O95157 252 aa13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 B2MP61769 119 aa13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 PAX5Q02548 391 aa13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 FAM201AQ5SY85 155 aa13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 PXDC1Q5TGL8 231 aa13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 FAM53AQ6NSI3 398 aaPredicted RBP13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 TGIF2LYQ8IUE0 185 aa13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 MBD6Q96DN6 1003 aa13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 DIRC2Q96SL1 478 aa13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 GINS3Q9BRX5 216 aa13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 LYRM2Q9NU23 88 aaPredicted RBP13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 TLN2Q9Y4G6 2542 aa13.72□□□□□ -0.21
CHMP1A-204ENST00000547687 NF1P21359 2839 aa13.71□□□□□ -0.21
CHMP1A-204ENST00000547687 SSTR5P35346 364 aa13.71□□□□□ -0.21
CHMP1A-204ENST00000547687 BLOC1S1P78537 153 aa13.71□□□□□ -0.21
CHMP1A-204ENST00000547687 EDDM3AQ14507 147 aa13.71□□□□□ -0.21
CHMP1A-204ENST00000547687 TRAT1Q6PIZ9 186 aa13.71□□□□□ -0.21
CHMP1A-204ENST00000547687 TMEM252Q8N6L7 170 aa13.71□□□□□ -0.21
CHMP1A-204ENST00000547687 PPP1R35Q8TAP8 253 aa13.71□□□□□ -0.21
CHMP1A-204ENST00000547687 PERPQ96FX8 193 aa13.71□□□□□ -0.21
CHMP1A-204ENST00000547687 SNX22Q96L94 193 aa13.71□□□□□ -0.21
CHMP1A-204ENST00000547687 TMEM204Q9BSN7 226 aa13.71□□□□□ -0.21
CHMP1A-204ENST00000547687 OR2D2Q9H210 308 aa13.71□□□□□ -0.21
CHMP1A-204ENST00000547687 HRH4Q9H3N8 390 aa13.71□□□□□ -0.21
CHMP1A-204ENST00000547687 CD55P08174 381 aa13.71□□□□□ -0.22
CHMP1A-204ENST00000547687 SEC11BP0C7V7 166 aa13.71□□□□□ -0.22
CHMP1A-204ENST00000547687 PPP1CCP36873 323 aaKnown RBP13.71□□□□□ -0.22
CHMP1A-204ENST00000547687 LPAR6P43657 344 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms