RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 TRAT1Q6PIZ9 186 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 LRP11Q86VZ4 500 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 RFESDQ8TAC1 157 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 WDR61Q9GZS3 305 aaKnown RBP12.97□□□□□ -0.33
BRF1-212ENST00000547562 DUSP13Q9UII6 198 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 SRRM5B3KS81 715 aa12.96□□□□□ -0.33
BRF1-212ENST00000547562 C15orf65H3BRN8 121 aa12.96□□□□□ -0.33
BRF1-212ENST00000547562 SPINT2O43291 252 aa12.96□□□□□ -0.33
BRF1-212ENST00000547562 ZNF737O75373 536 aa12.96□□□□□ -0.33
BRF1-212ENST00000547562 HOXA1P49639 335 aaPredicted RBP12.96□□□□□ -0.33
BRF1-212ENST00000547562 RAB5BP61020 215 aa12.96□□□□□ -0.33
BRF1-212ENST00000547562 SERF2P84101 59 aa12.96□□□□□ -0.33
BRF1-212ENST00000547562 HTD2P86397 168 aa12.96□□□□□ -0.33
BRF1-212ENST00000547562 KHDC3LQ587J8 217 aa12.96□□□□□ -0.33
BRF1-212ENST00000547562 OR4C12Q96R67 309 aa12.96□□□□□ -0.33
BRF1-212ENST00000547562 VSIRQ9H7M9 311 aa12.96□□□□□ -0.33
BRF1-212ENST00000547562 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.96□□□□□ -0.33
BRF1-212ENST00000547562 H3BQ15 152 aa12.96□□□□□ -0.34
BRF1-212ENST00000547562 CLDN14O95500 239 aa12.96□□□□□ -0.34
BRF1-212ENST00000547562 ARG1P05089 322 aa12.96□□□□□ -0.34
BRF1-212ENST00000547562 SLC38A11Q08AI6 406 aa12.96□□□□□ -0.34
BRF1-212ENST00000547562 EDDM3AQ14507 147 aa12.96□□□□□ -0.34
BRF1-212ENST00000547562 TIMM23BQ5SRD1 257 aa12.96□□□□□ -0.34
BRF1-212ENST00000547562 ZNF474Q6S9Z5 364 aaPredicted RBP12.96□□□□□ -0.34
BRF1-212ENST00000547562 ZNF66Q6ZN08 573 aa12.96□□□□□ -0.34
BRF1-212ENST00000547562 CYB561D1Q8N8Q1 229 aa12.96□□□□□ -0.34
BRF1-212ENST00000547562 S100PBPQ96BU1 408 aa12.96□□□□□ -0.34
BRF1-212ENST00000547562 AGMATQ9BSE5 352 aa12.96□□□□□ -0.34
BRF1-212ENST00000547562 DCTN5Q9BTE1 182 aa12.96□□□□□ -0.34
BRF1-212ENST00000547562 PSG11Q9UQ72 335 aa12.96□□□□□ -0.34
BRF1-212ENST00000547562 FAM215AQ9Y5M1 114 aa12.96□□□□□ -0.34
BRF1-212ENST00000547562 IGKV1D-17A0A075B6S4 117 aa12.95□□□□□ -0.34
BRF1-212ENST00000547562 A0A1W2PPE2 198 aa12.95□□□□□ -0.34
BRF1-212ENST00000547562 LINC00473A8K010 186 aa12.95□□□□□ -0.34
BRF1-212ENST00000547562 DEFB108AA8MXU0 73 aa12.95□□□□□ -0.34
BRF1-212ENST00000547562 C1orf196B1AJZ1 125 aa12.95□□□□□ -0.34
BRF1-212ENST00000547562 ST8SIA5O15466 376 aa12.95□□□□□ -0.34
BRF1-212ENST00000547562 ADH4P08319 380 aa12.95□□□□□ -0.34
BRF1-212ENST00000547562 FBP1P09467 338 aa12.95□□□□□ -0.34
BRF1-212ENST00000547562 NUBP1P53384 320 aa12.95□□□□□ -0.34
BRF1-212ENST00000547562 CEBPGP53567 150 aa12.95□□□□□ -0.34
BRF1-212ENST00000547562 OR8G2PQ6IF36 304 aa12.95□□□□□ -0.34
BRF1-212ENST00000547562 ALKBH2Q6NS38 261 aa12.95□□□□□ -0.34
BRF1-212ENST00000547562 HSD17B10Q99714 261 aaKnown RBP12.95□□□□□ -0.34
BRF1-212ENST00000547562 LOC102723971A0A1B0GUV8 181 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 M0R1B8 84 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 CFHR2P36980 270 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 ZNF726P1Q15940 193 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 Q3ZCU0 254 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 FAM90A1Q86YD7 464 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 MBD3L1Q8WWY6 194 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 TAF15Q92804 592 aaKnown RBP eCLIP12.94□□□□□ -0.34
BRF1-212ENST00000547562 LAMP3Q9UQV4 416 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 HCFC1P51610 2035 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 NBEAQ8NFP9 2946 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 UBE2L5PA0A1B0GUS4 154 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 RAB29O14966 203 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 IGHV3-13P01766 116 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 AKR1D1P51857 326 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 B2MP61769 119 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 EIF2S3LQ2VIR3 472 aaKnown RBP12.94□□□□□ -0.34
BRF1-212ENST00000547562 Q6ZS92 163 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 RPRMLQ8N4K4 120 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 FAM24BQ8N5W8 94 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 GNG13Q9P2W3 67 aa12.94□□□□□ -0.34
BRF1-212ENST00000547562 RAB5AP20339 215 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 RPL35P42766 123 aaKnown RBP12.93□□□□□ -0.34
BRF1-212ENST00000547562 RPS23P62266 143 aaKnown RBP12.93□□□□□ -0.34
BRF1-212ENST00000547562 ZNF787Q6DD87 383 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 H2BFWTQ7Z2G1 175 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 ZNF429Q86V71 674 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 GCSAMQ8N6F7 178 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 OR10G4Q8NGN3 311 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 RAB39BQ96DA2 213 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 RCC1LQ96I51 464 aaKnown RBP12.93□□□□□ -0.34
BRF1-212ENST00000547562 CLN8Q9UBY8 286 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 WASF3Q9UPY6 502 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 CRYAAP02489 173 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 GZMHP20718 246 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 LINC00205P59089 165 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 RTP5Q14D33 572 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 TMEM41BQ5BJD5 291 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 C1orf185Q5T7R7 199 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 LCN15Q6UWW0 184 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 SSX7Q7RTT5 188 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 EDARADDQ8WWZ3 215 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 PINX1Q96BK5 328 aaKnown RBP12.93□□□□□ -0.34
BRF1-212ENST00000547562 OR2V2Q96R30 315 aa12.93□□□□□ -0.34
BRF1-212ENST00000547562 SEBOXQ9HB31 216 aaPredicted RBP12.93□□□□□ -0.34
BRF1-212ENST00000547562 RIF1Q5UIP0 2472 aaKnown RBP12.93□□□□□ -0.34
BRF1-212ENST00000547562 hCG_1809904A0A1W2PP81 198 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 A0A1W2PR64 198 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 A0A1W2PRV1 198 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 MGST3O14880 152 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 AGAP20933 346 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 GLRXP35754 106 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 KLF3P57682 345 aaPredicted RBP12.92□□□□□ -0.34
BRF1-212ENST00000547562 LTC4SQ16873 150 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 C3orf36Q3SXR2 165 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 ZNF561Q8N587 486 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms