RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 ZNF2Q9BSG1 426 aaPredicted RBP18.64■□□□□ 0.58
SMARCD1-203ENST00000547247 IGKV1D-13A0A0B4J2D9 117 aa18.64■□□□□ 0.57
SMARCD1-203ENST00000547247 ANKRD20A5PA0PJZ0 165 aa18.64■□□□□ 0.57
SMARCD1-203ENST00000547247 RAB3DO95716 219 aa18.64■□□□□ 0.57
SMARCD1-203ENST00000547247 CD74P04233 296 aa18.64■□□□□ 0.57
SMARCD1-203ENST00000547247 IGKV1-13P0DP09 117 aa18.64■□□□□ 0.57
SMARCD1-203ENST00000547247 HERV-K104P61576 105 aa18.64■□□□□ 0.57
SMARCD1-203ENST00000547247 KRTAP21-3Q3LHN1 58 aa18.64■□□□□ 0.57
SMARCD1-203ENST00000547247 DRAM1Q8N682 238 aa18.64■□□□□ 0.57
SMARCD1-203ENST00000547247 CFHR4Q92496 578 aa18.64■□□□□ 0.57
SMARCD1-203ENST00000547247 TINAGL1Q9GZM7 467 aaPredicted RBP18.64■□□□□ 0.57
SMARCD1-203ENST00000547247 AKIP1Q9NQ31 210 aa18.64■□□□□ 0.57
SMARCD1-203ENST00000547247 SDHAF2Q9NX18 166 aa18.64■□□□□ 0.57
SMARCD1-203ENST00000547247 PROP1O75360 226 aa18.63■□□□□ 0.57
SMARCD1-203ENST00000547247 SLC22A5O76082 557 aa18.63■□□□□ 0.57
SMARCD1-203ENST00000547247 UBA52P62987 128 aaKnown RBP18.63■□□□□ 0.57
SMARCD1-203ENST00000547247 HABP2Q14520 560 aaPredicted RBP18.63■□□□□ 0.57
SMARCD1-203ENST00000547247 TMEM17Q86X19 198 aa18.63■□□□□ 0.57
SMARCD1-203ENST00000547247 MFSD4AQ8N468 514 aa18.63■□□□□ 0.57
SMARCD1-203ENST00000547247 ZNF645Q8N7E2 425 aa18.63■□□□□ 0.57
SMARCD1-203ENST00000547247 S100ZQ8WXG8 99 aa18.63■□□□□ 0.57
SMARCD1-203ENST00000547247 TRIM63Q969Q1 353 aa18.63■□□□□ 0.57
SMARCD1-203ENST00000547247 MRPL20Q9BYC9 149 aaKnown RBP18.63■□□□□ 0.57
SMARCD1-203ENST00000547247 CHIAQ9BZP6 476 aa18.63■□□□□ 0.57
SMARCD1-203ENST00000547247 VPREB3Q9UKI3 123 aa18.63■□□□□ 0.57
SMARCD1-203ENST00000547247 AKAIN1P0CW23 69 aa18.62■□□□□ 0.57
SMARCD1-203ENST00000547247 CD24P25063 80 aa18.62■□□□□ 0.57
SMARCD1-203ENST00000547247 FXYD4P59646 89 aa18.62■□□□□ 0.57
SMARCD1-203ENST00000547247 LY6EQ16553 131 aa18.62■□□□□ 0.57
SMARCD1-203ENST00000547247 ARRDC1Q8N5I2 433 aa18.62■□□□□ 0.57
SMARCD1-203ENST00000547247 SECTM1Q8WVN6 248 aa18.62■□□□□ 0.57
SMARCD1-203ENST00000547247 CAPSLQ8WWF8 208 aa18.62■□□□□ 0.57
SMARCD1-203ENST00000547247 NABP2Q9BQ15 211 aa18.62■□□□□ 0.57
SMARCD1-203ENST00000547247 PITPNC1Q9UKF7 332 aa18.62■□□□□ 0.57
SMARCD1-203ENST00000547247 TCF19Q9Y242 345 aa18.62■□□□□ 0.57
SMARCD1-203ENST00000547247 FAM90A9PA6NNJ1 464 aa18.61■□□□□ 0.57
SMARCD1-203ENST00000547247 TRIM77I1YAP6 450 aa18.61■□□□□ 0.57
SMARCD1-203ENST00000547247 MEF2DQ14814 521 aa18.61■□□□□ 0.57
SMARCD1-203ENST00000547247 THNSL2Q86YJ6 484 aa18.61■□□□□ 0.57
SMARCD1-203ENST00000547247 OR4D10Q8NGI6 311 aa18.61■□□□□ 0.57
SMARCD1-203ENST00000547247 MOB3AQ96BX8 217 aa18.61■□□□□ 0.57
SMARCD1-203ENST00000547247 IGHV3-72A0A0B4J1Y9 119 aa18.6■□□□□ 0.57
SMARCD1-203ENST00000547247 M0R1X1 148 aa18.6■□□□□ 0.57
SMARCD1-203ENST00000547247 RNASE1P07998 156 aaKnown RBP18.6■□□□□ 0.57
SMARCD1-203ENST00000547247 FAM106CPP0CH98 169 aa18.6■□□□□ 0.57
SMARCD1-203ENST00000547247 CD1BP29016 333 aa18.6■□□□□ 0.57
SMARCD1-203ENST00000547247 AP3S2P59780 193 aa18.6■□□□□ 0.57
SMARCD1-203ENST00000547247 SLC5A7Q9GZV3 580 aa18.6■□□□□ 0.57
SMARCD1-203ENST00000547247 SNRNP70P08621 437 aaKnown RBP18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 CT45A6P0DMU7 189 aa18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 CT45A5P0DMU8 189 aa18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 CT45A7P0DMV0 189 aa18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 SRSF2Q01130 221 aaKnown RBP18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 LSAMPQ13449 338 aa18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 C16orf87Q6PH81 154 aa18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 TOMM5Q8N4H5 51 aa18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 OR4C16Q8NGL9 310 aa18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 C5orf30Q96GV9 206 aa18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 SDHCQ99643 169 aaPredicted RBP18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 AMY2AP04746 511 aa18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 HES1Q14469 280 aa18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 BAK1Q16611 211 aa18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 TRIQKQ629K1 86 aa18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 DRAXINQ8NBI3 349 aaPredicted RBP18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 CCL28Q9NRJ3 127 aa18.59■□□□□ 0.57
SMARCD1-203ENST00000547247 A6NDX4 124 aa18.58■□□□□ 0.56
SMARCD1-203ENST00000547247 DISC1C4P0D8 188 aa18.58■□□□□ 0.56
SMARCD1-203ENST00000547247 IGKV1D-33P01593 117 aa18.58■□□□□ 0.56
SMARCD1-203ENST00000547247 IGKV1-33P01594 117 aa18.58■□□□□ 0.56
SMARCD1-203ENST00000547247 IGLV2-14P01704 120 aa18.58■□□□□ 0.56
SMARCD1-203ENST00000547247 MSMO1Q15800 293 aa18.58■□□□□ 0.56
SMARCD1-203ENST00000547247 FAAP20Q6NZ36 180 aa18.58■□□□□ 0.56
SMARCD1-203ENST00000547247 LIAT1Q6ZQX7 453 aa18.58■□□□□ 0.56
SMARCD1-203ENST00000547247 BORCS5Q969J3 196 aa18.58■□□□□ 0.56
SMARCD1-203ENST00000547247 OR5H14A6NHG9 310 aa18.57■□□□□ 0.56
SMARCD1-203ENST00000547247 GPR137BO60478 399 aa18.57■□□□□ 0.56
SMARCD1-203ENST00000547247 INPP1P49441 399 aa18.57■□□□□ 0.56
SMARCD1-203ENST00000547247 KLF9Q13886 244 aaPredicted RBP18.57■□□□□ 0.56
SMARCD1-203ENST00000547247 EBI3Q14213 229 aa18.57■□□□□ 0.56
SMARCD1-203ENST00000547247 CCBE1Q6UXH8 406 aaPredicted RBP18.57■□□□□ 0.56
SMARCD1-203ENST00000547247 GLDNQ6ZMI3 551 aaPredicted RBP18.57■□□□□ 0.56
SMARCD1-203ENST00000547247 ZBTB34Q8NCN2 500 aa18.57■□□□□ 0.56
SMARCD1-203ENST00000547247 FXYD6Q9H0Q3 95 aa18.57■□□□□ 0.56
SMARCD1-203ENST00000547247 ZNF735P0CB33 412 aa18.56■□□□□ 0.56
SMARCD1-203ENST00000547247 MC5RP33032 325 aa18.56■□□□□ 0.56
SMARCD1-203ENST00000547247 FAUP35544 74 aaKnown RBP18.56■□□□□ 0.56
SMARCD1-203ENST00000547247 THBS3P49746 956 aa18.56■□□□□ 0.56
SMARCD1-203ENST00000547247 LINC00205P59089 165 aa18.56■□□□□ 0.56
SMARCD1-203ENST00000547247 SCGB2B2Q4G0G5 96 aa18.56■□□□□ 0.56
SMARCD1-203ENST00000547247 ZNF57Q68EA5 555 aaPredicted RBP18.56■□□□□ 0.56
SMARCD1-203ENST00000547247 LHFPL1Q86WI0 220 aa18.56■□□□□ 0.56
SMARCD1-203ENST00000547247 TMEM219Q86XT9 240 aa18.56■□□□□ 0.56
SMARCD1-203ENST00000547247 OR5AN1Q8NGI8 311 aa18.56■□□□□ 0.56
SMARCD1-203ENST00000547247 OR2T10Q8NGZ9 312 aa18.56■□□□□ 0.56
SMARCD1-203ENST00000547247 ZFAND2BQ8WV99 257 aa18.56■□□□□ 0.56
SMARCD1-203ENST00000547247 DEDD2Q8WXF8 326 aa18.56■□□□□ 0.56
SMARCD1-203ENST00000547247 ADTRPQ96IZ2 230 aa18.56■□□□□ 0.56
SMARCD1-203ENST00000547247 RAB18Q9NP72 206 aa18.56■□□□□ 0.56
SMARCD1-203ENST00000547247 H0YJW9 148 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 GNRHRP30968 328 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms