RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 DMKNQ6E0U4 476 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-208ENST00000546534 FAM71F2Q6NXP2 309 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 ZNF343Q6P1L6 599 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 LAX1Q8IWV1 398 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 OR5AN1Q8NGI8 311 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 GALMQ96C23 342 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 OVOL2Q9BRP0 275 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 ERVK13-1Q9NX77 482 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 AASSQ9UDR5 926 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 SLC23A1Q9UHI7 598 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 WASHC3Q9Y3C0 194 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 RAB29O14966 203 aa9.59□□□□□ -0.87
SCAF11-208ENST00000546534 SLC22A1O15245 554 aa9.59□□□□□ -0.87
SCAF11-208ENST00000546534 FUT3P21217 361 aa9.59□□□□□ -0.87
SCAF11-208ENST00000546534 FASP25445 335 aa9.59□□□□□ -0.87
SCAF11-208ENST00000546534 EWSR1Q01844 656 aaKnown RBP eCLIP9.59□□□□□ -0.87
SCAF11-208ENST00000546534 SIGIRRQ6IA17 410 aa9.59□□□□□ -0.87
SCAF11-208ENST00000546534 CEMP1Q6PRD7 247 aaPredicted RBP9.59□□□□□ -0.87
SCAF11-208ENST00000546534 MRPL30Q8TCC3 161 aaKnown RBP9.59□□□□□ -0.87
SCAF11-208ENST00000546534 GHSRQ92847 366 aa9.59□□□□□ -0.87
SCAF11-208ENST00000546534 MUL1Q969V5 352 aa9.59□□□□□ -0.87
SCAF11-208ENST00000546534 MYCBPQ99417 103 aaPredicted RBP9.59□□□□□ -0.87
SCAF11-208ENST00000546534 RNF5Q99942 180 aa9.59□□□□□ -0.87
SCAF11-208ENST00000546534 PARP12Q9H0J9 701 aaKnown RBP9.59□□□□□ -0.87
SCAF11-208ENST00000546534 BANF2Q9H503 90 aa9.59□□□□□ -0.87
SCAF11-208ENST00000546534 PIPOXQ9P0Z9 390 aa9.59□□□□□ -0.87
SCAF11-208ENST00000546534 GYG2O15488 501 aa9.58□□□□□ -0.88
SCAF11-208ENST00000546534 GLAP06280 429 aa9.58□□□□□ -0.88
SCAF11-208ENST00000546534 AADACP22760 399 aa9.58□□□□□ -0.88
SCAF11-208ENST00000546534 SSBP2P81877 361 aaPredicted RBP9.58□□□□□ -0.88
SCAF11-208ENST00000546534 XAF1Q6GPH4 301 aa9.58□□□□□ -0.88
SCAF11-208ENST00000546534 GLIPR1L1Q6UWM5 242 aa9.58□□□□□ -0.88
SCAF11-208ENST00000546534 BVESQ8NE79 360 aa9.58□□□□□ -0.88
SCAF11-208ENST00000546534 GATAD1Q8WUU5 269 aa9.58□□□□□ -0.88
SCAF11-208ENST00000546534 ABHD14BQ96IU4 210 aa9.58□□□□□ -0.88
SCAF11-208ENST00000546534 SELENOIQ9C0D9 397 aa9.58□□□□□ -0.88
SCAF11-208ENST00000546534 TINAGL1Q9GZM7 467 aaPredicted RBP9.58□□□□□ -0.88
SCAF11-208ENST00000546534 PEMTQ9UBM1 199 aa9.58□□□□□ -0.88
SCAF11-208ENST00000546534 OAZ3Q9UMX2 235 aa9.58□□□□□ -0.88
SCAF11-208ENST00000546534 KMT2AQ03164 3969 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 FAM90A7PA6NKC0 464 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 SNTNA6NMZ2 147 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 FAM90A23PA8MXZ1 464 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 AIREO43918 545 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 RBMXL2O75526 392 aaKnown RBP9.57□□□□□ -0.88
SCAF11-208ENST00000546534 GPX5O75715 221 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 BAG2O95816 211 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 IGKV1-16P04430 117 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 MGMTP16455 207 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 IGFBP3P17936 291 aaPredicted RBP9.57□□□□□ -0.88
SCAF11-208ENST00000546534 RPS16P62249 146 aaKnown RBP9.57□□□□□ -0.88
SCAF11-208ENST00000546534 RIPK1Q13546 671 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 HMGN3Q15651 99 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 GUCA2BQ16661 112 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 DEFB114Q30KQ6 69 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 DNAL1Q4LDG9 190 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 DRAXINQ8NBI3 349 aaPredicted RBP9.57□□□□□ -0.88
SCAF11-208ENST00000546534 IL1F10Q8WWZ1 152 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 SNAPC3Q92966 411 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 OR14A2Q96R54 314 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 TSNAXQ99598 290 aaKnown RBP9.57□□□□□ -0.88
SCAF11-208ENST00000546534 AMBNQ9NP70 447 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 STEAP1Q9UHE8 339 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 LRRC42Q9Y546 428 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 AP4S1Q9Y587 144 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 RYR1P21817 5038 aa9.57□□□□□ -0.88
SCAF11-208ENST00000546534 A0A0J9YWU9 116 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 SAC3D1A6NKF1 404 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 H3BNX3 289 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 PDCD6O75340 191 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 PROP1O75360 226 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 SPDEFO95238 335 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 CPEP16870 476 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 LINC00205P59089 165 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 PJVKQ0ZLH3 352 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 C6orf141Q5SZD1 244 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 JAGN1Q8N5M9 183 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 CCDC197Q8NCU1 140 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 OR13C5Q8NGS8 318 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 DYNLRB2Q8TF09 96 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 USMG5Q96IX5 58 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 Q96M66 194 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 ABRACLQ9P1F3 81 aa9.56□□□□□ -0.88
SCAF11-208ENST00000546534 KLK5Q9Y337 293 aaPredicted RBP9.56□□□□□ -0.88
SCAF11-208ENST00000546534 TRAV8-7A0A075B6U6 113 aa9.55□□□□□ -0.88
SCAF11-208ENST00000546534 A0A0B4J203 849 aa9.55□□□□□ -0.88
SCAF11-208ENST00000546534 BMPR1BO00238 502 aa9.55□□□□□ -0.88
SCAF11-208ENST00000546534 CRTAPO75718 401 aaPredicted RBP9.55□□□□□ -0.88
SCAF11-208ENST00000546534 LIMS3P0CW19 117 aa9.55□□□□□ -0.88
SCAF11-208ENST00000546534 LIMS4P0CW20 117 aa9.55□□□□□ -0.88
SCAF11-208ENST00000546534 EDN2P20800 178 aa9.55□□□□□ -0.88
SCAF11-208ENST00000546534 CCDC58Q4VC31 144 aa9.55□□□□□ -0.88
SCAF11-208ENST00000546534 AWAT2Q6E213 333 aa9.55□□□□□ -0.88
SCAF11-208ENST00000546534 RPL22L1Q6P5R6 122 aaKnown RBP9.55□□□□□ -0.88
SCAF11-208ENST00000546534 OR52I1Q8NGK6 324 aa9.55□□□□□ -0.88
SCAF11-208ENST00000546534 SLC7A6OSQ96CW6 309 aaPredicted RBP9.55□□□□□ -0.88
SCAF11-208ENST00000546534 AGMATQ9BSE5 352 aa9.55□□□□□ -0.88
SCAF11-208ENST00000546534 ZC4H2Q9NQZ6 224 aa9.55□□□□□ -0.88
SCAF11-208ENST00000546534 COA4Q9NYJ1 87 aa9.55□□□□□ -0.88
SCAF11-208ENST00000546534 GABRB1P18505 474 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms