RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 CXCL1P09341 107 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 HOXA5P20719 270 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 REG1BP48304 166 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 OR5I1Q13606 314 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 TRIP6Q15654 476 aaKnown RBP8.35□□□□□ -1.07
TRAF1-203ENST00000546084 FADS6Q8N9I5 356 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 TMEM178AQ8NBL3 297 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 FAM216AQ8WUB2 273 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 FAM210BQ96KR6 192 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 CITED1Q99966 193 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 CABLES2Q9BTV7 478 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 ZNF503-AS2A6NEH8 195 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 M0R143 59 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 ARR3P36575 388 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 RND1Q92730 232 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 BOD1Q96IK1 185 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 TMEM9BQ9NQ34 198 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 ANAPC10Q9UM13 185 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 hCG_38984A0A1B0GV85 526 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 TRDCB7Z8K6 153 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 SP1P08047 785 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 FGF7P21781 194 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 CD200P41217 278 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 RPL29P47914 159 aaKnown RBP8.34□□□□□ -1.07
TRAF1-203ENST00000546084 SELENOVP59797 346 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 HBG1P69891 147 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 HBG2P69892 147 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 GAMTQ14353 236 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 C1orf87Q8N0U7 546 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 LRRC29Q8WV35 223 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 GALMQ96C23 342 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 GPR146Q96CH1 333 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 GNPNAT1Q96EK6 184 aaPredicted RBP8.34□□□□□ -1.07
TRAF1-203ENST00000546084 TM2D1Q9BX74 207 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 ARV1Q9H2C2 271 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 A0A1W2PRD5 423 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 A0A1W2PRF3 423 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 A0A1W2PRM7 423 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 ZNF716A6NP11 495 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 SEC14L6B5MCN3 397 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 KLK10O43240 276 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 OR2H2O95918 312 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 IGHEP01854 428 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 ERVFRD-1P60508 538 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 PKIAP61925 76 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 HLA-DRB3P79483 266 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 C20orf204Q6ZNR8 217 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 OR4A16Q8NH70 328 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 MUCL1Q96DR8 90 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 NUDT11Q96G61 164 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 PROK2Q9HC23 129 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 DLL3Q9NYJ7 618 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 IGHV3-21A0A0B4J1V1 117 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 ZNF705FA8MVS1 300 aaPredicted RBP8.34□□□□□ -1.07
TRAF1-203ENST00000546084 K7N7A8 449 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 HBE1P02100 147 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 ZNF705DP0CH99 300 aaPredicted RBP8.34□□□□□ -1.07
TRAF1-203ENST00000546084 ZNF705BP0CI00 300 aaPredicted RBP8.34□□□□□ -1.07
TRAF1-203ENST00000546084 VDAC1P21796 283 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 CCL1P22362 96 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 GPR12P47775 334 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 GLIPR1P48060 266 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 ERVK-16P61578 105 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 FOXO1Q12778 655 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 VWA1Q6PCB0 445 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 GGNQ86UU5 652 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 MSI2Q96DH6 328 aaKnown RBP8.34□□□□□ -1.07
TRAF1-203ENST00000546084 GALNT14Q96FL9 552 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 PARD6AQ9NPB6 346 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 KIAA1456Q9P272 454 aa8.34□□□□□ -1.07
TRAF1-203ENST00000546084 RPL36A-HNRNPH2H7BZ11 118 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 SYNGR2O43760 224 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 HIST1H2BKO60814 126 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 PGLYRP1O75594 196 aaPredicted RBP8.33□□□□□ -1.08
TRAF1-203ENST00000546084 HIST1H2BJP06899 126 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 HIST1H2BOP23527 126 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 HIST1H2BBP33778 126 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 HIST1H2BDP58876 126 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 HIST1H2BCP62807 126 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 SLC35B1P78383 322 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 HIST2H2BEQ16778 126 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.33□□□□□ -1.08
TRAF1-203ENST00000546084 OR4C5Q8NGB2 326 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 HIST1H2BHQ93079 126 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 TMEM54Q969K7 222 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 ZDHHC16Q969W1 377 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 HIST1H2BNQ99877 126 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 HIST1H2BMQ99879 126 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 SF3B5Q9BWJ5 86 aaKnown RBP8.33□□□□□ -1.08
TRAF1-203ENST00000546084 TAAR3PQ9P1P4 343 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 ZDHHC8Q9ULC8 765 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 ZFYVE26Q68DK2 2539 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 TRGC1P0CF51 173 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 DTYMKP23919 212 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 SRPXP78539 464 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 CCL8P80075 99 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 SLC38A11Q08AI6 406 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 ELOBQ15370 118 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 ZNF385CQ66K41 422 aaPredicted RBP8.33□□□□□ -1.08
TRAF1-203ENST00000546084 LYG1Q8N1E2 194 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms