RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 ZNF474Q6S9Z5 364 aaPredicted RBP3.04□□□□□ -1.92
LINC01965-204ENST00000545549 RBMS3Q6XE24 437 aaKnown RBP3.04□□□□□ -1.92
LINC01965-204ENST00000545549 Q6ZS49 121 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 C1QL2Q7Z5L3 287 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 TBC1D26Q86UD7 250 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 IQCF2Q8IXL9 164 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 C1orf174Q8IYL3 243 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 PUSL1Q8N0Z8 303 aaKnown RBP3.04□□□□□ -1.92
LINC01965-204ENST00000545549 FAM58AQ8N1B3 248 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 ZNF561Q8N587 486 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 SLC35G3Q8N808 338 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 ZIC4Q8N9L1 334 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 HSD17B11Q8NBQ5 300 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 SYT8Q8NBV8 401 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 OR10AD1Q8NGE0 317 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 OR56B2PQ8NGI1 322 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 OR5D13Q8NGL4 314 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 OR4A4PQ8NGN8 299 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 OR2G3Q8NGZ4 309 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 LILRB1Q8NHL6 650 aaPredicted RBP3.04□□□□□ -1.92
LINC01965-204ENST00000545549 PPP1R35Q8TAP8 253 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 FAM213BQ8TBF2 198 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 TCTEX1D2Q8WW35 142 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 RND1Q92730 232 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 RNASE6Q93091 150 aaKnown RBP3.04□□□□□ -1.92
LINC01965-204ENST00000545549 MRPL24Q96A35 216 aaKnown RBP3.04□□□□□ -1.92
LINC01965-204ENST00000545549 SPSB4Q96A44 273 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 MARS2Q96GW9 593 aaKnown RBP3.04□□□□□ -1.92
LINC01965-204ENST00000545549 AKR1E2Q96JD6 320 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 RAB40CQ96S21 281 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 NRIP2Q9BQI9 281 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 GINS3Q9BRX5 216 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 TMEM204Q9BSN7 226 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 SFXN3Q9BWM7 321 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 C1QTNF6Q9BXI9 259 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 PKIBQ9C010 78 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 TMEM222Q9H0R3 208 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 WNT5BQ9H1J7 359 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 SLC35B3Q9H1N7 401 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 WDR13Q9H1Z4 485 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 LIME1Q9H400 295 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 TUBG2Q9NRH3 451 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 PLSCR4Q9NRQ2 329 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 DECR2Q9NUI1 292 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 RCC2Q9P258 522 aaKnown RBP3.04□□□□□ -1.92
LINC01965-204ENST00000545549 ZNF319Q9P2F9 582 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 TRAPPC2LQ9UL33 140 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 KCNS2Q9ULS6 477 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 LAMP3Q9UQV4 416 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 RCL1Q9Y2P8 373 aaKnown RBP3.04□□□□□ -1.92
LINC01965-204ENST00000545549 ATP23Q9Y6H3 246 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 WNK2Q9Y3S1 2297 aa3.04□□□□□ -1.92
LINC01965-204ENST00000545549 PQLC2LA1A4F0 135 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 SLC22A20A6NK97 555 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 TMEM210A6NLX4 147 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 DEFB108AA8MXU0 73 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 B4DEV8 164 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 C17orf112F2Z3M2 114 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 H0Y980 276 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 H0YIZ8 118 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 J3QT63 122 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 ZNF561-AS1K7EIQ3 104 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 DNASE2O00115 360 aaPredicted RBP3.03□□□□□ -1.92
LINC01965-204ENST00000545549 HSD17B6O14756 317 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 HS3ST1O14792 307 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 SSSCA1O60232 199 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 SOX15O60248 233 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 RBMXL2O75526 392 aaKnown RBP3.03□□□□□ -1.92
LINC01965-204ENST00000545549 NXPH2O95156 264 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 GOSR1O95249 250 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 IGHV3-9P01782 118 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 MBP02144 154 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 SNRNP70P08621 437 aaKnown RBP3.03□□□□□ -1.92
LINC01965-204ENST00000545549 DANCRP0C864 163 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 SPP1P10451 314 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 SLC25A6P12236 298 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 COX5AP20674 150 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 BCL3P20749 454 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 PTAFRP25105 342 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 ACKR3P25106 362 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 S100PP25815 95 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 S100A2P29034 98 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 GCH1P30793 250 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 IL2RGP31785 369 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 SNCAP37840 140 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 LPAR6P43657 344 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 ASCL1P50553 236 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 CEBPGP53567 150 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 UBE2KP61086 200 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 HLA-DRB3P79483 266 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 S100A12P80511 92 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 EWSR1Q01844 656 aaKnown RBP eCLIP3.03□□□□□ -1.92
LINC01965-204ENST00000545549 IL24Q13007 206 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 CLINT1Q14677 625 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 GABRA6Q16445 453 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 GUCA2BQ16661 112 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 SP6Q3SY56 376 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 TM4SF20Q53R12 229 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 TMEM177Q53S58 311 aa3.03□□□□□ -1.92
LINC01965-204ENST00000545549 KRBOX4Q5JUW0 171 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms