RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 LYG1Q8N1E2 194 aa24.9■■□□□ 1.58
CCM2-219ENST00000544363 ZNF596Q8TC21 504 aa24.9■■□□□ 1.58
CCM2-219ENST00000544363 TMEM133Q9H2Q1 129 aa24.9■■□□□ 1.58
CCM2-219ENST00000544363 ONECUT1Q9UBC0 465 aa24.9■■□□□ 1.58
CCM2-219ENST00000544363 A8MXK9 166 aa24.9■■□□□ 1.58
CCM2-219ENST00000544363 SERPINE2P07093 398 aa24.9■■□□□ 1.58
CCM2-219ENST00000544363 NOXA1Q86UR1 476 aa24.9■■□□□ 1.58
CCM2-219ENST00000544363 LINC00311Q8N616 119 aa24.9■■□□□ 1.58
CCM2-219ENST00000544363 IL22RA2Q969J5 263 aa24.9■■□□□ 1.58
CCM2-219ENST00000544363 SAA2-SAA4A0A096LPE2 208 aa24.89■■□□□ 1.57
CCM2-219ENST00000544363 MPTX1A8MV57 137 aa24.89■■□□□ 1.57
CCM2-219ENST00000544363 SAA2P0DJI9 122 aaPredicted RBP24.89■■□□□ 1.57
CCM2-219ENST00000544363 SLC35G3Q8N808 338 aa24.89■■□□□ 1.57
CCM2-219ENST00000544363 TCTEX1D2Q8WW35 142 aa24.89■■□□□ 1.57
CCM2-219ENST00000544363 RANBP3Q9H6Z4 567 aaPredicted RBP24.89■■□□□ 1.57
CCM2-219ENST00000544363 FBN2P35556 2912 aa24.88■■□□□ 1.57
CCM2-219ENST00000544363 J3QR06 171 aa24.88■■□□□ 1.57
CCM2-219ENST00000544363 M0R1X1 148 aa24.88■■□□□ 1.57
CCM2-219ENST00000544363 DUTP33316 252 aaKnown RBP24.88■■□□□ 1.57
CCM2-219ENST00000544363 ABHD12Q8N2K0 398 aa24.88■■□□□ 1.57
CCM2-219ENST00000544363 TCTEX1D1Q8N7M0 179 aa24.88■■□□□ 1.57
CCM2-219ENST00000544363 OR9G1Q8NH87 305 aa24.88■■□□□ 1.57
CCM2-219ENST00000544363 RBPMSQ93062 196 aaKnown RBP24.88■■□□□ 1.57
CCM2-219ENST00000544363 OR10C1Q96KK4 312 aa24.88■■□□□ 1.57
CCM2-219ENST00000544363 ZNF251Q9BRH9 671 aa24.88■■□□□ 1.57
CCM2-219ENST00000544363 HELZ2Q9BYK8 2649 aaKnown RBP24.87■■□□□ 1.57
CCM2-219ENST00000544363 IGHV4-30-2A0A087WSY4 118 aa24.87■■□□□ 1.57
CCM2-219ENST00000544363 LINC00473A8K010 186 aa24.87■■□□□ 1.57
CCM2-219ENST00000544363 G3V3Q6 166 aa24.87■■□□□ 1.57
CCM2-219ENST00000544363 M0R1W7 72 aa24.87■■□□□ 1.57
CCM2-219ENST00000544363 DNASE1P24855 282 aa24.87■■□□□ 1.57
CCM2-219ENST00000544363 GZMKP49863 264 aa24.87■■□□□ 1.57
CCM2-219ENST00000544363 ZNF585BQ52M93 769 aa24.87■■□□□ 1.57
CCM2-219ENST00000544363 Q5BKY6 102 aa24.87■■□□□ 1.57
CCM2-219ENST00000544363 C1orf229Q6ZS94 237 aaPredicted RBP24.87■■□□□ 1.57
CCM2-219ENST00000544363 ZNRD1Q9P1U0 126 aa24.87■■□□□ 1.57
CCM2-219ENST00000544363 TMED3Q9Y3Q3 217 aa24.87■■□□□ 1.57
CCM2-219ENST00000544363 PIGBOS1A0A0B4J2F0 54 aa24.86■■□□□ 1.57
CCM2-219ENST00000544363 DUXBA0A1W2PPF3 345 aa24.86■■□□□ 1.57
CCM2-219ENST00000544363 ENSAO43768 121 aaKnown RBP24.86■■□□□ 1.57
CCM2-219ENST00000544363 NKX2-5P52952 324 aaPredicted RBP24.86■■□□□ 1.57
CCM2-219ENST00000544363 CYCSP99999 105 aaKnown RBP24.86■■□□□ 1.57
CCM2-219ENST00000544363 HIST2H2BCQ6DN03 193 aa24.86■■□□□ 1.57
CCM2-219ENST00000544363 C2orf50Q96LR7 162 aa24.86■■□□□ 1.57
CCM2-219ENST00000544363 NMES1Q9C002 83 aa24.86■■□□□ 1.57
CCM2-219ENST00000544363 FAM212BQ9NTI7 297 aaPredicted RBP24.86■■□□□ 1.57
CCM2-219ENST00000544363 BEX4Q9NWD9 120 aaPredicted RBP24.86■■□□□ 1.57
CCM2-219ENST00000544363 TACC2O95359 2948 aa24.86■■□□□ 1.57
CCM2-219ENST00000544363 IGHV4-61A0A0C4DH41 118 aa24.86■■□□□ 1.57
CCM2-219ENST00000544363 ARF6P62330 175 aa24.86■■□□□ 1.57
CCM2-219ENST00000544363 LCN2P80188 198 aa24.86■■□□□ 1.57
CCM2-219ENST00000544363 Q8N7P7 452 aa24.86■■□□□ 1.57
CCM2-219ENST00000544363 S1PR3Q99500 378 aa24.86■■□□□ 1.57
CCM2-219ENST00000544363 LINC00205P59089 165 aa24.85■■□□□ 1.57
CCM2-219ENST00000544363 PAX2Q02962 417 aa24.85■■□□□ 1.57
CCM2-219ENST00000544363 DRAXINQ8NBI3 349 aaPredicted RBP24.85■■□□□ 1.57
CCM2-219ENST00000544363 HYLS1Q96M11 299 aa24.85■■□□□ 1.57
CCM2-219ENST00000544363 ARHGAP32A7KAX9 2087 aa24.85■■□□□ 1.57
CCM2-219ENST00000544363 FOXH1O75593 365 aa24.84■■□□□ 1.57
CCM2-219ENST00000544363 RPA2P15927 270 aa24.84■■□□□ 1.57
CCM2-219ENST00000544363 BRWD1-AS2P59051 145 aa24.84■■□□□ 1.57
CCM2-219ENST00000544363 NCR3LG1Q68D85 454 aa24.84■■□□□ 1.57
CCM2-219ENST00000544363 SPAG16Q8N0X2 631 aa24.84■■□□□ 1.57
CCM2-219ENST00000544363 KIR3DL3Q8N743 410 aa24.84■■□□□ 1.57
CCM2-219ENST00000544363 IGHV2-26A0A0B4J1V2 119 aa24.83■■□□□ 1.57
CCM2-219ENST00000544363 IGKV1-39P01597 117 aa24.83■■□□□ 1.57
CCM2-219ENST00000544363 IGKV1D-39P04432 117 aa24.83■■□□□ 1.57
CCM2-219ENST00000544363 LPAR6P43657 344 aa24.83■■□□□ 1.57
CCM2-219ENST00000544363 CLEC12BQ2HXU8 276 aa24.83■■□□□ 1.57
CCM2-219ENST00000544363 IAH1Q2TAA2 248 aaPredicted RBP24.83■■□□□ 1.57
CCM2-219ENST00000544363 C1orf122Q6ZSJ8 110 aa24.83■■□□□ 1.57
CCM2-219ENST00000544363 OR10X1Q8NGY0 326 aa24.83■■□□□ 1.57
CCM2-219ENST00000544363 TNFRSF14Q92956 283 aa24.83■■□□□ 1.57
CCM2-219ENST00000544363 TOR1AO14656 332 aa24.83■■□□□ 1.56
CCM2-219ENST00000544363 RAMP3O60896 148 aa24.83■■□□□ 1.56
CCM2-219ENST00000544363 VDAC1P21796 283 aa24.83■■□□□ 1.56
CCM2-219ENST00000544363 DLX1P56177 255 aa24.83■■□□□ 1.56
CCM2-219ENST00000544363 OR2B11Q5JQS5 317 aa24.83■■□□□ 1.56
CCM2-219ENST00000544363 OR11H4Q8NGC9 324 aa24.83■■□□□ 1.56
CCM2-219ENST00000544363 PPP1R1CQ8WVI7 109 aa24.83■■□□□ 1.56
CCM2-219ENST00000544363 CLEC7AQ9BXN2 247 aa24.83■■□□□ 1.56
CCM2-219ENST00000544363 IGHV2-70DA0A0C4DH43 119 aa24.82■■□□□ 1.56
CCM2-219ENST00000544363 DEFB113Q30KQ7 82 aa24.82■■□□□ 1.56
CCM2-219ENST00000544363 ZNF833PQ6ZTB9 187 aa24.82■■□□□ 1.56
CCM2-219ENST00000544363 CD300LFQ8TDQ1 290 aa24.82■■□□□ 1.56
CCM2-219ENST00000544363 COMMD9Q9P000 198 aa24.82■■□□□ 1.56
CCM2-219ENST00000544363 POLR3KQ9Y2Y1 108 aaPredicted RBP24.82■■□□□ 1.56
CCM2-219ENST00000544363 CELSR2Q9HCU4 2923 aa24.81■■□□□ 1.56
CCM2-219ENST00000544363 THBS3P49746 956 aa24.81■■□□□ 1.56
CCM2-219ENST00000544363 PRRX1P54821 245 aa24.81■■□□□ 1.56
CCM2-219ENST00000544363 FGL1Q08830 312 aa24.81■■□□□ 1.56
CCM2-219ENST00000544363 LRRC75A-AS1Q8N1F1 130 aa24.81■■□□□ 1.56
CCM2-219ENST00000544363 ADTRPQ96IZ2 230 aa24.81■■□□□ 1.56
CCM2-219ENST00000544363 GSKIPQ9P0R6 139 aa24.81■■□□□ 1.56
CCM2-219ENST00000544363 PRELID3BQ9Y3B1 194 aa24.81■■□□□ 1.56
CCM2-219ENST00000544363 KPTNQ9Y664 436 aa24.81■■□□□ 1.56
CCM2-219ENST00000544363 FAM157AC9JC47 383 aa24.8■■□□□ 1.56
CCM2-219ENST00000544363 PRTN3P24158 256 aa24.8■■□□□ 1.56
CCM2-219ENST00000544363 IL15RAQ13261 267 aa24.8■■□□□ 1.56
CCM2-219ENST00000544363 NMSQ5H8A3 153 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms