RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 PDLIM4P50479 330 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 NRN1LQ496H8 165 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 LIAT1Q6ZQX7 453 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 UBALD1Q8TB05 177 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 RBMXL1Q96E39 390 aaKnown RBP12.7□□□□□ -0.38
CHFR-223ENST00000544268 HIST1H2AAQ96QV6 131 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 MAGT1Q9H0U3 335 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 IGKV1-6A0A0C4DH72 117 aa12.69□□□□□ -0.38
CHFR-223ENST00000544268 XKRY2A2RUG3 117 aa12.69□□□□□ -0.38
CHFR-223ENST00000544268 CCKARP32238 428 aa12.69□□□□□ -0.38
CHFR-223ENST00000544268 SPIN3Q5JUX0 258 aa12.69□□□□□ -0.38
CHFR-223ENST00000544268 ZNF818PQ6ZRF7 136 aa12.69□□□□□ -0.38
CHFR-223ENST00000544268 C9orf106Q8NAJ2 232 aa12.69□□□□□ -0.38
CHFR-223ENST00000544268 CLDND2Q8NHS1 167 aa12.69□□□□□ -0.38
CHFR-223ENST00000544268 ACY3Q96HD9 319 aa12.69□□□□□ -0.38
CHFR-223ENST00000544268 KIR2DL5BA0A0G2JN68 375 aa12.69□□□□□ -0.38
CHFR-223ENST00000544268 KIR2DL5BA0A0G2JPC4 375 aa12.69□□□□□ -0.38
CHFR-223ENST00000544268 OMGP23515 440 aa12.69□□□□□ -0.38
CHFR-223ENST00000544268 ATP6V0CP27449 155 aa12.69□□□□□ -0.38
CHFR-223ENST00000544268 TMPRSS3P57727 454 aa12.69□□□□□ -0.38
CHFR-223ENST00000544268 ACSF3Q4G176 576 aaPredicted RBP12.69□□□□□ -0.38
CHFR-223ENST00000544268 VHLLQ6RSH7 139 aa12.69□□□□□ -0.38
CHFR-223ENST00000544268 KIR2DL5AQ8N109 375 aa12.69□□□□□ -0.38
CHFR-223ENST00000544268 TMEM18Q96B42 140 aa12.69□□□□□ -0.38
CHFR-223ENST00000544268 RP1L1Q8IWN7 2480 aaPredicted RBP12.68□□□□□ -0.38
CHFR-223ENST00000544268 HS3ST1O14792 307 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 RPL23AP62750 156 aaKnown RBP12.68□□□□□ -0.38
CHFR-223ENST00000544268 ZNF266Q14584 549 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 GUSBP1Q15486 140 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 ARSJQ5FYB0 599 aaPredicted RBP12.68□□□□□ -0.38
CHFR-223ENST00000544268 FBXW12Q6X9E4 464 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 MRPL21Q7Z2W9 205 aaKnown RBP12.68□□□□□ -0.38
CHFR-223ENST00000544268 CTDSP1Q9GZU7 261 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 IL36GQ9NZH8 169 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 DIDO1Q9BTC0 2240 aaKnown RBP12.68□□□□□ -0.38
CHFR-223ENST00000544268 TLN1Q9Y490 2541 aaKnown RBP12.68□□□□□ -0.38
CHFR-223ENST00000544268 A6NNC1 897 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 RHBDL1O75783 438 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 SELEP16581 610 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 HERV-K104P61576 105 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 IZUMO4Q1ZYL8 232 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 TBC1D26Q86UD7 250 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 GAPTQ8N292 157 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 RDH5Q92781 318 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 CLUHP3Q96NS8 147 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 HIPK2Q9H2X6 1198 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 KIAA2026Q5HYC2 2103 aa12.68□□□□□ -0.38
CHFR-223ENST00000544268 C3orf85A0A1B0GTC6 90 aa12.67□□□□□ -0.38
CHFR-223ENST00000544268 FAM24AA6NFZ4 105 aa12.67□□□□□ -0.38
CHFR-223ENST00000544268 AHRRA9YTQ3 701 aa12.67□□□□□ -0.38
CHFR-223ENST00000544268 ST8SIA3O43173 380 aa12.67□□□□□ -0.38
CHFR-223ENST00000544268 FAM87AP0C7U9 286 aa12.67□□□□□ -0.38
CHFR-223ENST00000544268 MDKP21741 143 aaPredicted RBP12.67□□□□□ -0.38
CHFR-223ENST00000544268 CXorf66Q5JRM2 361 aaPredicted RBP12.67□□□□□ -0.38
CHFR-223ENST00000544268 FAM214BQ7L5A3 538 aa12.67□□□□□ -0.38
CHFR-223ENST00000544268 FAM185AQ8N0U4 392 aa12.67□□□□□ -0.38
CHFR-223ENST00000544268 CNEP1R1Q8N9A8 125 aa12.67□□□□□ -0.38
CHFR-223ENST00000544268 PPP5D1E7EU14 171 aa12.67□□□□□ -0.38
CHFR-223ENST00000544268 ATXN7O15265 892 aaPredicted RBP12.67□□□□□ -0.38
CHFR-223ENST00000544268 MPPED1O15442 326 aa12.67□□□□□ -0.38
CHFR-223ENST00000544268 HBE1P02100 147 aa12.67□□□□□ -0.38
CHFR-223ENST00000544268 ZNF880Q6PDB4 577 aa12.67□□□□□ -0.38
CHFR-223ENST00000544268 Q8NA96 180 aa12.67□□□□□ -0.38
CHFR-223ENST00000544268 CCL28Q9NRJ3 127 aa12.67□□□□□ -0.38
CHFR-223ENST00000544268 INTS1Q8N201 2190 aaKnown RBP12.66□□□□□ -0.38
CHFR-223ENST00000544268 TMEM238C9JI98 176 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 KIR2DL2P43627 348 aaPredicted RBP12.66□□□□□ -0.38
CHFR-223ENST00000544268 EWSR1Q01844 656 aaKnown RBP eCLIP12.66□□□□□ -0.38
CHFR-223ENST00000544268 FOXF2Q12947 444 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 FAM90A2PQ658T7 463 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 FAM180AQ6UWF9 173 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 NUDT10Q8NFP7 164 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 POM121L2Q96KW2 1035 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 PYGO2Q9BRQ0 406 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 A0A1W2PN81 502 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 CELA3BP08861 270 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 CHRNA7P36544 502 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 RPL29P47914 159 aaKnown RBP12.66□□□□□ -0.38
CHFR-223ENST00000544268 NCR3LG1Q68D85 454 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 TMEM211Q6ICI0 200 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 VWA1Q6PCB0 445 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 BTNL3Q6UXE8 466 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 SEM1Q6ZVN7 128 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 MRPL41Q8IXM3 137 aaKnown RBP12.66□□□□□ -0.38
CHFR-223ENST00000544268 ZDHHC23Q8IYP9 409 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 Q9N2K0 584 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 ZNF391Q9UJN7 358 aa12.66□□□□□ -0.38
CHFR-223ENST00000544268 LOC102723971A0A1B0GUV8 181 aa12.65□□□□□ -0.38
CHFR-223ENST00000544268 TRDCB7Z8K6 153 aa12.65□□□□□ -0.38
CHFR-223ENST00000544268 CA6P23280 308 aa12.65□□□□□ -0.38
CHFR-223ENST00000544268 UCNP55089 124 aa12.65□□□□□ -0.38
CHFR-223ENST00000544268 ERVS71-1P61550 626 aa12.65□□□□□ -0.38
CHFR-223ENST00000544268 PMS2P11Q13670 270 aa12.65□□□□□ -0.38
CHFR-223ENST00000544268 CEACAM21Q3KPI0 293 aa12.65□□□□□ -0.38
CHFR-223ENST00000544268 TGIF2LYQ8IUE0 185 aa12.65□□□□□ -0.38
CHFR-223ENST00000544268 LGI3Q8N145 548 aa12.65□□□□□ -0.38
CHFR-223ENST00000544268 OR4D5Q8NGN0 318 aa12.65□□□□□ -0.38
CHFR-223ENST00000544268 OR1K1Q8NGR3 316 aa12.65□□□□□ -0.38
CHFR-223ENST00000544268 BOD1Q96IK1 185 aa12.65□□□□□ -0.38
CHFR-223ENST00000544268 SDF2L1Q9HCN8 221 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms