RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 OR11H12B2RN74 326 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 IL9P15248 144 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 CFAP161Q6P656 301 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 OVCH2Q7RTZ1 564 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 HOGA1Q86XE5 327 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 OR11H1Q8NG94 326 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 OR11H2Q8NH07 326 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 PSMG3Q9BT73 122 aaPredicted RBP9.03□□□□□ -0.96
PCDH9-204ENST00000544246 PTPRZ1P23471 2315 aaPredicted RBP9.03□□□□□ -0.96
PCDH9-204ENST00000544246 HSPB1P04792 205 aaKnown RBP9.03□□□□□ -0.96
PCDH9-204ENST00000544246 CXCL3P19876 107 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 DDTP30046 118 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 FAM209BQ5JX69 171 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 AMER3Q8N944 861 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 SLC6A13Q9NSD5 602 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 TRBV9A0A0B4J1U6 114 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 A0A1B0GWB2 263 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 SRIP30626 198 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 MMP16P51512 607 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 RBKSQ9H477 322 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 ANKRD31Q8N7Z5 1873 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 COL24A1Q17RW2 1714 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 SNRPD3P62318 126 aaKnown RBP9.03□□□□□ -0.96
PCDH9-204ENST00000544246 GGTLC2Q14390 218 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 Q6ZS52 159 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 SPNS2Q8IVW8 549 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 C10orf111Q8N326 155 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 MARS2Q96GW9 593 aaKnown RBP9.03□□□□□ -0.96
PCDH9-204ENST00000544246 V9GYH0 126 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 CXorf51AA0A1B0GTR3 108 aa9.02□□□□□ -0.96
PCDH9-204ENST00000544246 TNFSF14O43557 240 aa9.02□□□□□ -0.96
PCDH9-204ENST00000544246 SLC25A20O43772 301 aa9.02□□□□□ -0.96
PCDH9-204ENST00000544246 FGF5P12034 268 aa9.02□□□□□ -0.96
PCDH9-204ENST00000544246 ZNF250P15622 560 aa9.02□□□□□ -0.96
PCDH9-204ENST00000544246 FXYD3Q14802 87 aa9.02□□□□□ -0.96
PCDH9-204ENST00000544246 TRBV20OR9-2A0A075B6H5 130 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 TGIF2-C20orf24A0A0A6YYL0 155 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 FXYD1O00168 92 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 CCL21O00585 134 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 IGLV3-25P01717 112 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 ASAH2BP0C7U1 165 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 SFTPCP11686 197 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 PNLIPP16233 465 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 RBM11P57052 281 aaKnown RBP9.02□□□□□ -0.97
PCDH9-204ENST00000544246 HCP5Q6MZN7 132 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 C16orf47Q6ZP98 133 aaPredicted RBP9.02□□□□□ -0.97
PCDH9-204ENST00000544246 TCF23Q7RTU1 214 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 C1orf174Q8IYL3 243 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 SHISA5Q8N114 240 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 H0Y980 276 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 H7C1H1 209 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 RRHO14718 337 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 PF4P02776 101 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 MUC1P15941 1255 aaPredicted RBP9.02□□□□□ -0.97
PCDH9-204ENST00000544246 FAM159AQ6UWV7 190 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 CHST5Q9GZS9 411 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 OR5AC2Q9NZP5 309 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 TNFRSF18Q9Y5U5 241 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 SIPA1L3O60292 1781 aaPredicted RBP9.02□□□□□ -0.97
PCDH9-204ENST00000544246 A0A1B0GV90 55 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 ASPDHA6ND91 283 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 DNASE2BQ8WZ79 361 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 PIMREGQ9BSJ6 248 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 AICDAQ9GZX7 198 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 DPH3P1Q9H4G8 78 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 KCNK7Q9Y2U2 307 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 SHANK3Q9BYB0 1731 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 TRAV21A0A0B4J279 112 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 HAX1O00165 279 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 CFDP00746 253 aaPredicted RBP9.02□□□□□ -0.97
PCDH9-204ENST00000544246 F12P00748 615 aaPredicted RBP9.02□□□□□ -0.97
PCDH9-204ENST00000544246 THY1P04216 161 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 ADRA2AP08913 450 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 CNTFRP26992 372 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 C1orf185Q5T7R7 199 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 TUBD1Q9UJT1 453 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 SDK1Q7Z5N4 2213 aa9.02□□□□□ -0.97
PCDH9-204ENST00000544246 TMEM250H0YL14 139 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 CTSVO60911 334 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 RUNX1Q01196 453 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 MMD2Q8IY49 270 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 WDR34Q96EX3 536 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 HOXA5P20719 270 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 RPL8P62917 257 aaKnown RBP9.01□□□□□ -0.97
PCDH9-204ENST00000544246 NEUROG1Q92886 237 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 WFIKKN1Q96NZ8 548 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 CCL13Q99616 98 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 CISD1Q9NZ45 108 aaKnown RBP9.01□□□□□ -0.97
PCDH9-204ENST00000544246 MBD1Q9UIS9 605 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-204ENST00000544246 KLK13Q9UKR3 277 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 A0A1B0GTL3 188 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 RPL34P49207 117 aaKnown RBP9.01□□□□□ -0.97
PCDH9-204ENST00000544246 PCSK4Q6UW60 755 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 PRSS41Q7RTY9 318 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 EEF1AKMT3Q96AZ1 226 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 OR51M1Q9H341 326 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 SLC25A53Q5H9E4 307 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 ATG4DQ86TL0 474 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-204ENST00000544246 BIVMQ86UB2 503 aa9.01□□□□□ -0.97
PCDH9-204ENST00000544246 TTC9CQ8N5M4 171 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 927.2 ms