RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 A0A0U1RQV5 110 aa11.12□□□□□ -0.63
TUBGCP2-210ENST00000543663 NCBP2LA6PVI3 153 aaKnown RBP11.12□□□□□ -0.63
TUBGCP2-210ENST00000543663 CD8AP01732 235 aa11.12□□□□□ -0.63
TUBGCP2-210ENST00000543663 GAPDHP04406 335 aaKnown RBP11.12□□□□□ -0.63
TUBGCP2-210ENST00000543663 CCL8P80075 99 aa11.12□□□□□ -0.63
TUBGCP2-210ENST00000543663 RTP5Q14D33 572 aa11.12□□□□□ -0.63
TUBGCP2-210ENST00000543663 HIST3H3Q16695 136 aa11.12□□□□□ -0.63
TUBGCP2-210ENST00000543663 FGFRL1Q8N441 504 aa11.12□□□□□ -0.63
TUBGCP2-210ENST00000543663 FLYWCH2Q96CP2 140 aaKnown RBP11.12□□□□□ -0.63
TUBGCP2-210ENST00000543663 RBKSQ9H477 322 aa11.12□□□□□ -0.63
TUBGCP2-210ENST00000543663 WDFY4Q6ZS81 3184 aa11.12□□□□□ -0.63
TUBGCP2-210ENST00000543663 HRASP01112 189 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 KHDC3LQ587J8 217 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 OR5A2Q8NGI9 324 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 DNASE2BQ8WZ79 361 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 RNF126Q9BV68 326 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 ACACBO00763 2458 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 CSPG4Q6UVK1 2322 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 H3BTX0 84 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 K7EQM0 130 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 M0R143 59 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 GATCO43716 136 aaKnown RBP11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 PGLYRP1O75594 196 aaPredicted RBP11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 ST6GALNAC3Q8NDV1 305 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 OR4C5Q8NGB2 326 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 IER2Q9BTL4 223 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 SF3B5Q9BWJ5 86 aaKnown RBP11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 RNF122Q9H9V4 155 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 WASHC3Q9Y3C0 194 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 A0A1B0GV90 55 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 PTTG1IPP53801 180 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 MEF2BQ02080 365 aaPredicted RBP11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 MOB1BQ7L9L4 216 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 SMIM15Q7Z3B0 74 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 MOB3AQ96BX8 217 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 Q96M66 194 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 TIMP4Q99727 224 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 IGKV3-7A0A075B6H7 116 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 SPAARA0A1B0GVQ0 90 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 IL3RAP26951 378 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 OTX1P32242 354 aaPredicted RBP11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 RANP62826 216 aaKnown RBP11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 TNFAIP6P98066 277 aaPredicted RBP11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 ARL16Q0P5N6 197 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 OR1B1Q8NGR6 318 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 RTBDNQ9BSG5 229 aaPredicted RBP11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 ZNF552Q9H707 407 aaPredicted RBP11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 PITPNC1Q9UKF7 332 aa11.11□□□□□ -0.63
TUBGCP2-210ENST00000543663 MED13Q9UHV7 2174 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 J3QRE1 110 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 MIC13Q5XKP0 118 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 RAB24Q969Q5 203 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 CLEC5AQ9NY25 188 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 ARFGEF3Q5TH69 2177 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 IGSF23A1L1A6 192 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 ZG16O60844 167 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 CLDN14O95500 239 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 PRF1P14222 555 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 STARD6P59095 220 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 FXYD3Q14802 87 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 Q56UQ5 140 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 ASPHD2Q6ICH7 369 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 ATOH7Q8N100 152 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 MUC15Q8N387 334 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 OR2M7Q8NG81 312 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 STARD4Q96DR4 205 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 FAM122AQ96E09 287 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 RNF24Q9Y225 148 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 KIF26AQ9ULI4 1882 aaPredicted RBP11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 A0A1B0GTI1 187 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 MELTFP08582 738 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 BPIFB3P59826 476 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 MARVELD3Q96A59 401 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 HSPB9Q9BQS6 159 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 SH2D2AQ9NP31 389 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 CBLN4Q9NTU7 201 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 TUBD1Q9UJT1 453 aa11.1□□□□□ -0.63
TUBGCP2-210ENST00000543663 CELSR3Q9NYQ7 3312 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 IGKV3D-11A0A0A0MRZ8 115 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 A0A1B0GU03 582 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 J3KRW8 73 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 OR2H2O95918 312 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 CELA3AP09093 270 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 DANCRP0C864 163 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 CSN1S1P47710 185 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 TMEM183BQ1AE95 376 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 DCAF10Q5QP82 559 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 ABHD12Q8N2K0 398 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 PAQR4Q8N4S7 273 aaPredicted RBP11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 OR1L6Q8NGR2 347 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 GGACTQ9BVM4 153 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 TMEM140Q9NV12 185 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 DLL3Q9NYJ7 618 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 CLDN16Q9Y5I7 305 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 TIMM9Q9Y5J7 89 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 PCNX3Q9H6A9 2034 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 IGKV1-9A0A0C4DH69 117 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 A0A0G2JMM0 328 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 CTXND1A0A1B0GTU2 59 aa11.09□□□□□ -0.63
TUBGCP2-210ENST00000543663 A0A1W2PPB8 328 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms