RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	TIMM23	O14925	209 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	TXNL1	O43396	289 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	TNFSF12	O43508	249 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	ZNF735	P0CB33	412 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	S100G	P29377	79 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	ZNF137P	P52743	207 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	ZNF816	Q0VGE8	651 aa	Predicted RBP	8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	HES1	Q14469	280 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	LRRC75B	Q2VPJ9	315 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	ABCA11P	Q4W5N1	156 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	ZNF660	Q6AZW8	331 aa	Predicted RBP	8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	IDO2	Q6ZQW0	420 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	ZNF833P	Q6ZTB9	187 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	ODF3L1	Q8IXM7	274 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	CMTM1	Q8IZ96	169 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	OR8H3	Q8N146	312 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	DRAXIN	Q8NBI3	349 aa	Predicted RBP	8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	BORCS5	Q969J3	196 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	ST6GALNAC6	Q969X2	333 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	ZNF48	Q96MX3	618 aa	Predicted RBP	8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	MRPL20	Q9BYC9	149 aa	Known RBP	8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	MEGF9	Q9H1U4	602 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	DPAGT1	Q9H3H5	408 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	GAB2	Q9UQC2	676 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	NAV3	Q8IVL0	2385 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	NAP1L6	A6NFF2	107 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545		H3BUX3	64 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545		H7C2Y5	167 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	HOXA3	O43365	443 aa	Predicted RBP	8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	UPK1B	O75841	260 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	IFNA2	P01563	188 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	IGHV4-59	P01825	116 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	FAM106CP	P0CH98	169 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	CT45A6	P0DMU7	189 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	CT45A5	P0DMU8	189 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	CT45A7	P0DMV0	189 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	CD24	P25063	80 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	HNF4G	Q14541	408 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	LY6E	Q16553	131 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	PHLDA2	Q53GA4	152 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	AADACL3	Q5VUY0	350 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	FAM71F2	Q6NXP2	309 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545		Q6YL49	198 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	GLDN	Q6ZMI3	551 aa	Predicted RBP	8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	LDLRAD3	Q86YD5	345 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	SLC38A6	Q8IZM9	456 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	ZBTB34	Q8NCN2	500 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	ZFAND1	Q8TCF1	268 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	MARCH1	Q8TCQ1	289 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	TCTEX1D2	Q8WW35	142 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	SSMEM1	Q8WWF3	244 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	DEDD2	Q8WXF8	326 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	AKR1E2	Q96JD6	320 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	SCGB3A2	Q96PL1	93 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	DUX5	Q96PT3	197 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	NABP2	Q9BQ15	211 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	C7orf50	Q9BRJ6	194 aa	Known RBP	8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545	FXYD6	Q9H0Q3	95 aa		8.19	□□□□□ -1.1
CPSF7-221	ENST00000543545		A0A1W2PPI3	338 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	GPR31	O00270	319 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	TCF21	O43680	179 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	APOA2	P02652	100 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	PI3	P19957	117 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	GNRHR	P30968	328 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	ECI1	P42126	302 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	IER3	P46695	156 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	THBS3	P49746	956 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	UCP3	P55916	312 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	LINC00205	P59089	165 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	CBX3	Q13185	183 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	AANAT	Q16613	207 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	MZT2B	Q6NZ67	158 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	ZNF66	Q6ZN08	573 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	ZNF818P	Q6ZRF7	136 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	OR5R1	Q8NH85	324 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	C5orf30	Q96GV9	206 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	ADTRP	Q96IZ2	230 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	JMJD8	Q96S16	334 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	HSD17B10	Q99714	261 aa	Known RBP	8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	ZNF251	Q9BRH9	671 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	COPZ2	Q9P299	210 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	C14orf166	Q9Y224	244 aa	Known RBP	8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	PRELID3B	Q9Y3B1	194 aa		8.18	□□□□□ -1.1
CPSF7-221	ENST00000543545	FN1	P02751	2386 aa	Known RBP	8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	RNF212B	A8MTL3	300 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	VGLL3	A8MV65	326 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	PLA2G10	O15496	165 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	LYRM1	O43325	122 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	PROP1	O75360	226 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	PGLYRP1	O75594	196 aa	Predicted RBP	8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	IGKV1D-33	P01593	117 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	IGKV1-33	P01594	117 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	SNRNP70	P08621	437 aa	Known RBP	8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	CD1B	P29016	333 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	MC5R	P33032	325 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	DUT	P33316	252 aa	Known RBP	8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	CCR6	P51684	374 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	DYNLT3	P51808	116 aa		8.17	□□□□□ -1.1

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms