RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 DYRK1AQ13627 763 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 SCGB2B2Q4G0G5 96 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 C9orf152Q5JTZ5 239 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 TRIQKQ629K1 86 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 ZNF57Q68EA5 555 aaPredicted RBP5.08□□□□□ -1.6
LTBR-212ENST00000543542 FAM71F2Q6NXP2 309 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 STEAP1BQ6NZ63 245 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 GLDNQ6ZMI3 551 aaPredicted RBP5.08□□□□□ -1.6
LTBR-212ENST00000543542 LIAT1Q6ZQX7 453 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 ZNF833PQ6ZTB9 187 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 LYSMD2Q8IV50 215 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 ODF3L1Q8IXM7 274 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 Q8N402 240 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 TOMM5Q8N4H5 51 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 ZNF645Q8N7E2 425 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 TMEM229BQ8NBD8 167 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 DRAXINQ8NBI3 349 aaPredicted RBP5.08□□□□□ -1.6
LTBR-212ENST00000543542 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.08□□□□□ -1.6
LTBR-212ENST00000543542 OR2T10Q8NGZ9 312 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 FAM216AQ8WUB2 273 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 ZFAND2BQ8WV99 257 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 SMIM4Q8WVI0 70 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 BORCS5Q969J3 196 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 NABP2Q9BQ15 211 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 SLC25A33Q9BSK2 321 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 THAP7Q9BT49 309 aaPredicted RBP5.08□□□□□ -1.6
LTBR-212ENST00000543542 MRPL20Q9BYC9 149 aaKnown RBP5.08□□□□□ -1.6
LTBR-212ENST00000543542 SLC5A7Q9GZV3 580 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 TOLLIPQ9H0E2 274 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 SDHAF2Q9NX18 166 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 TAS2R8Q9NYW2 309 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 MTFP1Q9UDX5 166 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 CUBNO60494 3623 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 FN1P02751 2386 aaKnown RBP5.08□□□□□ -1.6
LTBR-212ENST00000543542 SONP18583 2426 aaKnown RBP5.07□□□□□ -1.6
LTBR-212ENST00000543542 IGKV1D-13A0A0B4J2D9 117 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 A6NDX4 124 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 TNFSF12O43508 249 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 GSTZ1O43708 216 aaPredicted RBP5.07□□□□□ -1.6
LTBR-212ENST00000543542 MOSP00540 346 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 AKAIN1P0CW23 69 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 IGKV1-13P0DP09 117 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 TBPP20226 339 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 MC5RP33032 325 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 FAUP35544 74 aaKnown RBP5.07□□□□□ -1.6
LTBR-212ENST00000543542 THBS3P49746 956 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 ZNF137PP52743 207 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 PPP5CP53041 499 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 AP3S2P59780 193 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 MEF2DQ14814 521 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 PLGLAQ15195 96 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 ABCA11PQ4W5N1 156 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 LPCAT3Q6P1A2 487 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 OVCH2Q7RTZ1 564 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 C16orf82Q7Z2V1 217 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 CCDC190Q86UF4 302 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 THNSL2Q86YJ6 484 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.07□□□□□ -1.6
LTBR-212ENST00000543542 OR4C13Q8NGP0 309 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 PIFOQ8TCI5 191 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 TCTEX1D2Q8WW35 142 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 GIMAP1Q8WWP7 306 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 S100ZQ8WXG8 99 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 CFHR4Q92496 578 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 ST6GALNAC6Q969X2 333 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 ADTRPQ96IZ2 230 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 EAF1Q96JC9 268 aaPredicted RBP5.07□□□□□ -1.6
LTBR-212ENST00000543542 RASL11BQ9BPW5 248 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 ZNF251Q9BRH9 671 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 AGMATQ9BSE5 352 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 C19orf24Q9BVV8 132 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 TINAGL1Q9GZM7 467 aaPredicted RBP5.07□□□□□ -1.6
LTBR-212ENST00000543542 NPFFR1Q9GZQ6 430 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 CCL28Q9NRJ3 127 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 SLC35D1Q9NTN3 355 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 MCUBQ9NWR8 336 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 PTTG2Q9NZH5 202 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 C1RLQ9NZP8 487 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 KIAA1456Q9P272 454 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 ANAPC10Q9UM13 185 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 MOB4Q9Y3A3 225 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 PRELID3BQ9Y3B1 194 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 WASHC3Q9Y3C0 194 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 V9GYH0 126 aa5.07□□□□□ -1.6
LTBR-212ENST00000543542 LINC00854A0A1B0GVQ3 168 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 OR5H14A6NHG9 310 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 M0QZK8 103 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 FCGR3BO75015 233 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 OR2F2O95006 317 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 CT45A6P0DMU7 189 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 CT45A5P0DMU8 189 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 CT45A7P0DMV0 189 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 RRASP10301 218 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 RAG2P55895 527 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 RPL15P61313 204 aaKnown RBP5.06□□□□□ -1.6
LTBR-212ENST00000543542 RPS16P62249 146 aaKnown RBP5.06□□□□□ -1.6
LTBR-212ENST00000543542 TAGLNQ01995 201 aaKnown RBP5.06□□□□□ -1.6
LTBR-212ENST00000543542 ZNF45Q02386 682 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 FOXL1Q12952 345 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 CATR1Q13166 79 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms