RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 TCFL5Q9UL49 500 aa11.9□□□□□ -0.5
RPS6KC1-206ENST00000543354 SIAH2O43255 324 aa11.9□□□□□ -0.51
RPS6KC1-206ENST00000543354 NEURL1O76050 574 aa11.9□□□□□ -0.51
RPS6KC1-206ENST00000543354 AGAP20933 346 aa11.9□□□□□ -0.51
RPS6KC1-206ENST00000543354 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.9□□□□□ -0.51
RPS6KC1-206ENST00000543354 CALHM1Q8IU99 346 aa11.9□□□□□ -0.51
RPS6KC1-206ENST00000543354 NHLRC2Q8NBF2 726 aa11.9□□□□□ -0.51
RPS6KC1-206ENST00000543354 IGHV3OR15-7A0A075B7D8 119 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 SHISA7A6NL88 538 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 IGHV3-48P01763 117 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 SPCS3P61009 180 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 FGF12P61328 243 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 SLC25A45Q8N413 288 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 OR1L1Q8NH94 360 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 AUP1Q9Y679 476 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 SRP19P09132 144 aaKnown RBP11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 NPY1RP25929 384 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 REG1BP48304 166 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 C1orf53Q5VUE5 145 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 TDHQ8IZJ6 230 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 FLYWCH2Q96CP2 140 aaKnown RBP11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 TIMP4Q99727 224 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 PATJQ8NI35 1801 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 COLCA2A8K830 154 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 RAB29O14966 203 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 CBLN1P23435 193 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 IL3RAP26951 378 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 PCP4P48539 62 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 DEFB109BQ30KR1 87 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 TIMM9Q9Y5J7 89 aa11.89□□□□□ -0.51
RPS6KC1-206ENST00000543354 IGKV1-9A0A0C4DH69 117 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 A0A1B0GTQ1 180 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 H0Y980 276 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 RNPS1Q15287 305 aaKnown RBP11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 WDR74Q6RFH5 385 aaPredicted RBP11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 REC114Q7Z4M0 266 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 FAM117AQ9C073 453 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 IL36RNQ9UBH0 155 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 GDF9O60383 454 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 MDP1Q86V88 176 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 VKORC1L1Q8N0U8 176 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 ANGPTL4Q9BY76 406 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 CRISPLD2Q9H0B8 497 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 TMSB15BA0A087X1C1 80 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 PDE6DO43924 150 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 IGFBP3P17936 291 aaPredicted RBP11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 HOXA5P20719 270 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 IGFBP7Q16270 282 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 COL5A1-AS1Q5SY13 56 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 VWA1Q6PCB0 445 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 S100A7AQ86SG5 101 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 IMMP2LQ96T52 175 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 DLL3Q9NYJ7 618 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 PXMP4Q9Y6I8 212 aa11.88□□□□□ -0.51
RPS6KC1-206ENST00000543354 RALGAPA2Q2PPJ7 1873 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 TMPRSS2O15393 492 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 ADH4P08319 380 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 WDR73Q6P4I2 378 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 CPEB3Q8NE35 698 aaKnown RBP11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 OR1B1Q8NGR6 318 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 OR4S2Q8NH73 311 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 TMEM140Q9NV12 185 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 GBF1Q92538 1859 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 PMS2P1A4D2B8 440 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 FGF16O43320 207 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 ZNF766Q5HY98 468 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 MUC15Q8N387 334 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 CHRDL1Q9BU40 450 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 LAMA3Q16787 3333 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 FAM157AC9JC47 383 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 C5orf67F2Z3F1 127 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 BRS3P32247 399 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 SUCLG1P53597 346 aaKnown RBP11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 IGLV3-21P80748 117 aaPredicted RBP11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 CEACAM21Q3KPI0 293 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 VWCEQ96DN2 955 aa11.87□□□□□ -0.51
RPS6KC1-206ENST00000543354 OOEPA6NGQ2 149 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 OR2H2O95918 312 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 HBZP02008 142 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 COL10A1Q03692 680 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 TEPPQ6URK8 271 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 MOGAT3Q86VF5 341 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 ABHD12Q8N2K0 398 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 ZADH2Q8N4Q0 377 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 LEAP2Q969E1 77 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 M0QZK8 103 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 HIST1H2BKO60814 126 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 GGCTO75223 188 aaKnown RBP11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 GCGP01275 180 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 HIST1H2BJP06899 126 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 HIST1H2BOP23527 126 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 HIST1H2BBP33778 126 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 HIST1H2BDP58876 126 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 HIST1H2BCP62807 126 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 HIST2H2BEQ16778 126 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 HIST1H2BHQ93079 126 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 TMEM56Q96MV1 263 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 HIST1H2BNQ99877 126 aa11.86□□□□□ -0.51
RPS6KC1-206ENST00000543354 HIST1H2BMQ99879 126 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms