RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 INSIG2Q9Y5U4 225 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 PNLIPP16233 465 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 ATG4DQ86TL0 474 aaPredicted RBP16.91■□□□□ 0.3
HDAC4-215ENST00000543185 CREBBPQ92793 2442 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 NPIPB8E9PQR5 432 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 NPIPB7O75200 414 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 RBM11P57052 281 aaKnown RBP16.91■□□□□ 0.3
HDAC4-215ENST00000543185 MRPL24Q96A35 216 aaKnown RBP16.9■□□□□ 0.3
HDAC4-215ENST00000543185 RCC1P18754 421 aaPredicted RBP16.9■□□□□ 0.3
HDAC4-215ENST00000543185 CXCL2P19875 107 aa16.9■□□□□ 0.3
HDAC4-215ENST00000543185 CEACAM18A8MTB9 384 aa16.9■□□□□ 0.3
HDAC4-215ENST00000543185 PUSL1Q8N0Z8 303 aaKnown RBP16.9■□□□□ 0.3
HDAC4-215ENST00000543185 AKIRIN1Q9H9L7 192 aaPredicted RBP16.9■□□□□ 0.3
HDAC4-215ENST00000543185 CA7P43166 264 aa16.9■□□□□ 0.3
HDAC4-215ENST00000543185 ZNF137PP52743 207 aa16.9■□□□□ 0.3
HDAC4-215ENST00000543185 B4GALNT1Q00973 533 aa16.9■□□□□ 0.3
HDAC4-215ENST00000543185 A0A087WWC5 75 aa16.9■□□□□ 0.3
HDAC4-215ENST00000543185 CCL17Q92583 94 aa16.9■□□□□ 0.3
HDAC4-215ENST00000543185 A0A1W2PQM1 296 aa16.9■□□□□ 0.3
HDAC4-215ENST00000543185 NDUFS8O00217 210 aa16.9■□□□□ 0.3
HDAC4-215ENST00000543185 EML6Q6ZMW3 1958 aa16.89■□□□□ 0.3
HDAC4-215ENST00000543185 SOCS1O15524 211 aa16.89■□□□□ 0.29
HDAC4-215ENST00000543185 PRSS8Q16651 343 aa16.89■□□□□ 0.29
HDAC4-215ENST00000543185 ATOH1Q92858 354 aaPredicted RBP16.89■□□□□ 0.29
HDAC4-215ENST00000543185 CBLN4Q9NTU7 201 aa16.89■□□□□ 0.29
HDAC4-215ENST00000543185 J3QT63 122 aa16.89■□□□□ 0.29
HDAC4-215ENST00000543185 EML2O95834 649 aa16.89■□□□□ 0.29
HDAC4-215ENST00000543185 TMEM190Q8WZ59 177 aa16.89■□□□□ 0.29
HDAC4-215ENST00000543185 SPSB4Q96A44 273 aa16.89■□□□□ 0.29
HDAC4-215ENST00000543185 SMAD4Q13485 552 aaKnown RBP16.89■□□□□ 0.29
HDAC4-215ENST00000543185 VSTM2LQ96N03 204 aa16.89■□□□□ 0.29
HDAC4-215ENST00000543185 SAMD13Q5VXD3 122 aa16.89■□□□□ 0.29
HDAC4-215ENST00000543185 SGK494Q96LW2 274 aa16.89■□□□□ 0.29
HDAC4-215ENST00000543185 ISG15P05161 165 aa16.89■□□□□ 0.29
HDAC4-215ENST00000543185 ABHD3Q8WU67 409 aa16.89■□□□□ 0.29
HDAC4-215ENST00000543185 DLX6P56179 175 aa16.89■□□□□ 0.29
HDAC4-215ENST00000543185 RRN3P1Q2M238 152 aa16.89■□□□□ 0.29
HDAC4-215ENST00000543185 C2orf88Q9BSF0 95 aa16.89■□□□□ 0.29
HDAC4-215ENST00000543185 OR11H12B2RN74 326 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 WDR25Q64LD2 544 aaPredicted RBP16.88■□□□□ 0.29
HDAC4-215ENST00000543185 C8orf82Q6P1X6 216 aaPredicted RBP16.88■□□□□ 0.29
HDAC4-215ENST00000543185 OR11H1Q8NG94 326 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 OR11H2Q8NH07 326 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 ZCCHC14Q8WYQ9 949 aaKnown RBP16.88■□□□□ 0.29
HDAC4-215ENST00000543185 C3orf80F5H4A9 247 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 OR2H1Q9GZK4 316 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 MC5RP33032 325 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 MESTQ5EB52 335 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 KCNS1Q96KK3 526 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 SFXN3Q9BWM7 321 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 HEXA-AS1Q9H8Q6 139 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 PLXND1Q9Y4D7 1925 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 ARL14EPLP0DKL9 152 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 DYNLRB2Q8TF09 96 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 TMEM56-RWDD3S4R434 201 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 ANKRD33Q7Z3H0 272 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 SPEM1Q8N4L4 309 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 WNT5BQ9H1J7 359 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 OR2A4O95047 310 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 FHITP49789 147 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 HES3Q5TGS1 186 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 PATE1Q8WXA2 126 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 OR2A7Q96R45 310 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 PPP1R3EQ9H7J1 279 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 KLK13Q9UKR3 277 aa16.88■□□□□ 0.29
HDAC4-215ENST00000543185 TNFSF15O95150 251 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 TM4SF20Q53R12 229 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 ZNF714Q96N38 554 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 CCL28Q9NRJ3 127 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 PLSCR2Q9NRY7 297 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 SRIP30626 198 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 HIST1H1AQ02539 215 aaPredicted RBP16.87■□□□□ 0.29
HDAC4-215ENST00000543185 BHLHA15Q7RTS1 189 aaPredicted RBP16.87■□□□□ 0.29
HDAC4-215ENST00000543185 OR1K1Q8NGR3 316 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 GEMIN7Q9H840 131 aaKnown RBP16.87■□□□□ 0.29
HDAC4-215ENST00000543185 TMEM131Q92545 1883 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 PTP4A3O75365 173 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 Q6AWC8 147 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 IGHV3-43A0A0B4J1X8 118 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 IGHV3-43DP0DP04 118 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 EBLN2Q6P2I7 272 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 FBLIM1Q8WUP2 373 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 IL36RNQ9UBH0 155 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 PRDX2P32119 198 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 C2orf83Q53S99 150 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 AICDAQ9GZX7 198 aa16.87■□□□□ 0.29
HDAC4-215ENST00000543185 ROM1Q03395 351 aa16.86■□□□□ 0.29
HDAC4-215ENST00000543185 MOGAT3Q86VF5 341 aa16.86■□□□□ 0.29
HDAC4-215ENST00000543185 OR5A1Q8NGJ0 315 aa16.86■□□□□ 0.29
HDAC4-215ENST00000543185 OR4D5Q8NGN0 318 aa16.86■□□□□ 0.29
HDAC4-215ENST00000543185 USF3Q68DE3 2245 aa16.86■□□□□ 0.29
HDAC4-215ENST00000543185 AUP1Q9Y679 476 aa16.86■□□□□ 0.29
HDAC4-215ENST00000543185 CD8AP01732 235 aa16.86■□□□□ 0.29
HDAC4-215ENST00000543185 PHF7Q9BWX1 381 aaPredicted RBP16.86■□□□□ 0.29
HDAC4-215ENST00000543185 TRAV8-7A0A075B6U6 113 aa16.86■□□□□ 0.29
HDAC4-215ENST00000543185 DLL1O00548 723 aa16.86■□□□□ 0.29
HDAC4-215ENST00000543185 ATP5LO75964 103 aa16.86■□□□□ 0.29
HDAC4-215ENST00000543185 VSIG8P0DPA2 414 aa16.86■□□□□ 0.29
HDAC4-215ENST00000543185 AQP3Q92482 292 aa16.86■□□□□ 0.29
HDAC4-215ENST00000543185 TRAV30A0A087WSZ9 112 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms