RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 RNASEK-C17orf49H0YIS7 233 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 M0R1X1 148 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 CREBL2O60519 120 aaPredicted RBP8.69□□□□□ -1.02
DDB1-221ENST00000543162 SFT2D2O95562 160 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 IFNA2P01563 188 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 IGLV1-47P01700 117 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 ARG1P05089 322 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 ANXA3P12429 323 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 HOXB4P17483 251 aaPredicted RBP8.69□□□□□ -1.02
DDB1-221ENST00000543162 SUPT4H1P63272 117 aaKnown RBP8.69□□□□□ -1.02
DDB1-221ENST00000543162 SLC9A3R2Q15599 337 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 HLA-DRB5Q30154 266 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 RPL39P5Q59GN2 51 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 CYB5R2Q6BCY4 276 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 HCP5Q6MZN7 132 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 ZNF66Q6ZN08 573 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 KCTD9Q7L273 389 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 ODF3L1Q8IXM7 274 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 PDZD9Q8IXQ8 264 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 OR52B4Q8NGK2 314 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 OR51H1Q8NH63 302 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 ZNF431Q8TF32 576 aaPredicted RBP8.69□□□□□ -1.02
DDB1-221ENST00000543162 CASTOR1Q8WTX7 329 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 LHX4Q969G2 390 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 C5orf30Q96GV9 206 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 HSD17B10Q99714 261 aaKnown RBP8.69□□□□□ -1.02
DDB1-221ENST00000543162 OR51J1Q9H342 316 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 C7orf69Q9H7B7 122 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 AUP1Q9Y679 476 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 CSMD2Q7Z408 3487 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 C3orf85A0A1B0GTC6 90 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 A0A1W2PRD5 423 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 A0A1W2PRF3 423 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 A0A1W2PRM7 423 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 BUB1B-PAK6H3BSN5 160 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 J3QLI3 93 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 SMAD7O15105 426 aaKnown RBP8.68□□□□□ -1.02
DDB1-221ENST00000543162 SSNA1O43805 119 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 PROP1O75360 226 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 DUS4LO95620 317 aaKnown RBP8.68□□□□□ -1.02
DDB1-221ENST00000543162 ZNF16P17020 682 aaPredicted RBP8.68□□□□□ -1.02
DDB1-221ENST00000543162 F2RP25116 425 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 UBE2E1P51965 193 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 ZNF137PP52743 207 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 CATR1Q13166 79 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 EIF4EBP1Q13541 118 aaPredicted RBP8.68□□□□□ -1.02
DDB1-221ENST00000543162 SP6Q3SY56 376 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 ZNF626Q68DY1 528 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 ZNF833PQ6ZTB9 187 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 CIARTQ8N365 385 aaPredicted RBP8.68□□□□□ -1.02
DDB1-221ENST00000543162 OR4P4Q8NGL7 312 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 TCTEX1D2Q8WW35 142 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 GALNT14Q96FL9 552 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 ZNF251Q9BRH9 671 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 LIN7CQ9NUP9 197 aaKnown RBP8.68□□□□□ -1.02
DDB1-221ENST00000543162 BAHCC1Q9P281 2608 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 ITPR3Q14573 2671 aa8.68□□□□□ -1.02
DDB1-221ENST00000543162 ASH1LQ9NR48 2969 aaKnown RBP8.68□□□□□ -1.02
DDB1-221ENST00000543162 ODF3BA8MYP8 253 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 H0Y980 276 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 FLNBO75369 2602 aaKnown RBP8.67□□□□□ -1.02
DDB1-221ENST00000543162 B3GALNT1O75752 331 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 OR5AC1P0C628 307 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 HTR1DP28221 377 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 DUTP33316 252 aaKnown RBP8.67□□□□□ -1.02
DDB1-221ENST00000543162 CEACAM3P40198 252 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 THBS3P49746 956 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 LGALS4P56470 323 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 RPL30P62888 115 aaKnown RBP8.67□□□□□ -1.02
DDB1-221ENST00000543162 FAM71F2Q6NXP2 309 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 C1orf229Q6ZS94 237 aaPredicted RBP8.67□□□□□ -1.02
DDB1-221ENST00000543162 C12orf45Q8N5I9 185 aaPredicted RBP8.67□□□□□ -1.02
DDB1-221ENST00000543162 DRAXINQ8NBI3 349 aaPredicted RBP8.67□□□□□ -1.02
DDB1-221ENST00000543162 UXS1Q8NBZ7 420 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 COQ8AQ8NI60 647 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 MITD1Q8WV92 249 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 ST6GALNAC6Q969X2 333 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 ADTRPQ96IZ2 230 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 TP53RKQ96S44 253 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 PHB2Q99623 299 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 MED28Q9H204 178 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 DPM3Q9P2X0 92 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 PRELID3BQ9Y3B1 194 aa8.67□□□□□ -1.02
DDB1-221ENST00000543162 CENPVL3A0A0U1RRI6 287 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 LINC00473A8K010 186 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 LEUTXA8MZ59 168 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 GAPDHP04406 335 aaKnown RBP8.66□□□□□ -1.02
DDB1-221ENST00000543162 SERPINE2P07093 398 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 EPHA1P21709 976 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 REG1BP48304 166 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 BCAP31P51572 246 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 SRPXP78539 464 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 TMEM187Q14656 261 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 ANKRD55Q3KP44 614 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 OR2B11Q5JQS5 317 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 TPTE2P1Q5T6R2 138 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 MINOS1Q5TGZ0 78 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 GPR157Q5UAW9 335 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 TGIF2LXQ8IUE1 241 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 CADM3Q8N126 398 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 288.7 ms