RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 YIPF3Q9GZM5 350 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 CHST5Q9GZS9 411 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 MOB1AQ9H8S9 216 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 LINC00574Q9H8X3 128 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 METTL1Q9UBP6 276 aaKnown RBP3.51□□□□□ -1.85
LIMS1-214ENST00000542845 AP3M1Q9Y2T2 418 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 V9GYY5 206 aaPredicted RBP3.51□□□□□ -1.85
LIMS1-214ENST00000542845 TMEM30CPA0ZSE6 113 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 KRTAP23-1A1A580 65 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 C2orf70A6NJV1 201 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 DHRS7CA6NNS2 312 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 TEX22C9J3V5 150 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 C11orf94C9JXX5 98 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 PPP5D1E7EU14 171 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 C15orf65H3BRN8 121 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 SPINT2O43291 252 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 LANCL1O43813 399 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 NDUFA3O95167 84 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 OR2C1O95371 312 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 IFNA21P01568 189 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 IFNA17P01571 189 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 P0DMU3 169 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 FAM231AP0DMU4 169 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 FAM231CP0DMU5 169 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 T-ENOLP0DO92 83 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 AADACP22760 399 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 CBLN1P23435 193 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 OR3A3P47888 321 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 CRIP2P52943 208 aaPredicted RBP3.5□□□□□ -1.85
LIMS1-214ENST00000542845 GINS1Q14691 196 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 ICAM4Q14773 271 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 FXYD3Q14802 87 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 ZSCAN26Q16670 478 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 LGALS9BQ3B8N2 356 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 PIGYQ3MUY2 71 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 ANXA2RQ3ZCQ2 193 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 SPATS1Q496A3 300 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 COQ5Q5HYK3 327 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 SLC35D3Q5M8T2 416 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 C6orf141Q5SZD1 244 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 ATAD3CQ5T2N8 411 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 C1orf134Q5TEV5 83 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 PVRIGQ6DKI7 326 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 FAM131AQ6UXB0 335 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 C5orf24Q7Z6I8 188 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 ARPINQ7Z6K5 226 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 CROCCP2Q86T23 111 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 SLC38A6Q8IZM9 456 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 C8orf31Q8N9H6 132 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 SUMF2Q8NBJ7 301 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 OR52M1Q8NGK5 317 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 OR1L6Q8NGR2 347 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 OR13C9Q8NGT0 318 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 OR10K1Q8NGX5 313 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 OR11H2Q8NH07 326 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 PP6455Q8WZ26 134 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 ADAT3Q96EY9 351 aaPredicted RBP3.5□□□□□ -1.85
LIMS1-214ENST00000542845 CMTM3Q96MX0 182 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 OPALINQ96PE5 141 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 TECRQ9NZ01 308 aaKnown RBP3.5□□□□□ -1.85
LIMS1-214ENST00000542845 ZNF581Q9P0T4 197 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 TRAPPC2LQ9UL33 140 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 TMEM14AQ9Y6G1 99 aa3.5□□□□□ -1.85
LIMS1-214ENST00000542845 AGRNO00468 2067 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 LOC107986453A0A1B0GWG9 222 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 ZNF670-ZNF695F2Z2N8 137 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 AIPO00170 330 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 ORC5O43913 435 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 KRT36O76013 467 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 HBZP02008 142 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 PRH1P02810 166 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 KRT8P05787 483 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 CCL1P22362 96 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 HLA-DMBP28068 263 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 LINC00205P59089 165 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 ADARB1P78563 741 aaKnown RBP3.49□□□□□ -1.85
LIMS1-214ENST00000542845 ATP5G2Q06055 141 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 RIPK1Q13546 671 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 EXOSC2Q13868 293 aaKnown RBP3.49□□□□□ -1.85
LIMS1-214ENST00000542845 GNMTQ14749 295 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 RSU1Q15404 277 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 SYT6Q5T7P8 510 aaPredicted RBP3.49□□□□□ -1.85
LIMS1-214ENST00000542845 TMEM236Q5W0B7 351 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 LPCAT4Q643R3 524 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 BTNL8Q6UX41 500 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 ZNF562Q6V9R5 426 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 Q6ZSN1 163 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 Q6ZTC4 211 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 ZNF767PQ75MW2 155 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 SLC35F2Q8IXU6 374 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 UXS1Q8NBZ7 420 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 TMEM116Q8NCL8 245 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 ZNF439Q8NDP4 499 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 OR10AC1Q8NH08 325 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 OR4K15Q8NH41 348 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 OR1L1Q8NH94 360 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 SAT2Q96F10 170 aaPredicted RBP3.49□□□□□ -1.85
LIMS1-214ENST00000542845 USMG5Q96IX5 58 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 GPER1Q99527 375 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 PHB2Q99623 299 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms