RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	COX5A	P20674	150 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	DUSP3	P51452	185 aa	Predicted RBP	10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	SSX2	Q16385	188 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	ACTL10	Q5JWF8	245 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	NUFIP2	Q7Z417	695 aa	Known RBP	10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	NEIL1	Q96FI4	390 aa	Predicted RBP	10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	THOC3	Q96J01	351 aa	Known RBP	10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	FAM173A	Q9BQD7	235 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	RTL8A	Q9BWD3	113 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	HES7	Q9BYE0	225 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	ZNF703	Q9H7S9	590 aa	Predicted RBP	10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	RYDEN	Q9NUL5	291 aa	Known RBP	10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	IGHV3-64D	A0A0J9YX35	117 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	ODAM	A1E959	279 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	ST8SIA5	O15466	376 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	MT-CO3	P00414	261 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	SELL	P14151	372 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	PDLIM4	P50479	330 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	LBH	Q53QV2	105 aa	Predicted RBP	10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	DBX2	Q6ZNG2	339 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	ZNF709	Q8N972	641 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	SCCPDH	Q8NBX0	429 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	TMEM18	Q96B42	140 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	NDUFAF3	Q9BU61	184 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	MBNL3	Q9NUK0	354 aa	Known RBP	10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	LRRC30	A6NM36	301 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	PATE3	B3GLJ2	98 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	ZG16	O60844	167 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	GGCT	O75223	188 aa	Known RBP	10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	NXPH2	O95156	264 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	SSPN	Q14714	243 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	WDR86	Q86TI4	376 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	ZNF645	Q8N7E2	425 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	CT55	Q8WUE5	264 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	OR2D2	Q9H210	308 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	OR6C3	Q9NZP0	311 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	B4GALT7	Q9UBV7	327 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	WIPI2	Q9Y4P8	454 aa		10.88	□□□□□ -0.67
DDX11-223	ENST00000542838	DNAJC13	O75165	2243 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	PMS2P5	A8MQ11	134 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	DEFA4	P12838	97 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	SRP14	P37108	136 aa	Known RBP	10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	MAGEA5	P43359	124 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	RPL30	P62888	115 aa	Known RBP	10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	PRSS8	Q16651	343 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	MCEMP1	Q8IX19	187 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	MRPL41	Q8IXM3	137 aa	Known RBP	10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	CISD2	Q8N5K1	135 aa	Known RBP	10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	DTD1	Q8TEA8	209 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	ZDHHC16	Q969W1	377 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	NPCDR1	Q9BY65	106 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	PLA2G3	Q9NZ20	509 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	PCSK5	Q92824	1860 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	SH2D1B	O14796	132 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	CHRNA7	P36544	502 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	C3AR1	Q16581	482 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	DCAF12	Q5T6F0	453 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	KCNIP4	Q6PIL6	250 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838		Q8IYB0	196 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	OR1L1	Q8NH94	360 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	C12orf49	Q9H741	205 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	KCNIP1	Q9NZI2	227 aa		10.87	□□□□□ -0.67
DDX11-223	ENST00000542838	C1QTNF9B	B2RNN3	333 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838		B4E171	279 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	RBMXL2	O75526	392 aa	Known RBP	10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	NEURL1	O76050	574 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	S1PR2	O95136	353 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	RAC2	P15153	192 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	TSPAN7	P41732	249 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	VASH2	Q86V25	355 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	DDA1	Q9BW61	102 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	POLDIP2	Q9Y2S7	368 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	C11orf94	C9JXX5	98 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	CDIPT	O14735	213 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	VENTX	O95231	258 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	IL18BP	O95998	194 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	FOSL1	P15407	271 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	OR3A1	P47881	315 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	CEBPD	P49716	269 aa	Predicted RBP	10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	ERVK11-1	P61568	191 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	GNB2	P62879	340 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	SLC10A1	Q14973	349 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	SPINK9	Q5DT21	86 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	FAM53A	Q6NSI3	398 aa	Predicted RBP	10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	TIPARP	Q7Z3E1	657 aa	Known RBP	10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	LURAP1	Q96LR2	239 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	TP53TG5	Q9Y2B4	290 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	GALR2	O43603	387 aa	Predicted RBP	10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	TYMS	P04818	313 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838		P0C879	139 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	NPPC	P23582	126 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	CNN1	P51911	297 aa	Known RBP	10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	FAM78B	Q5VT40	261 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	C6orf15	Q6UXA7	325 aa	Predicted RBP	10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	MDP1	Q86V88	176 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	ZBTB34	Q8NCN2	500 aa		10.86	□□□□□ -0.67
DDX11-223	ENST00000542838	BEND2	Q8NDZ0	799 aa		10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms