RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 MRGPRGQ86SM5 289 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 OR8I2Q8N0Y5 310 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 LFNGQ8NES3 379 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 OR2G3Q8NGZ4 309 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 OR1P1Q8NH06 330 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 OR4X1Q8NH49 305 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 MRPL24Q96A35 216 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 SLAMF6Q96DU3 332 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 RNF125Q96EQ8 232 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 CIB3Q96Q77 187 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 SIGMAR1Q99720 223 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 C20orf144Q9BQM9 153 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 HES7Q9BYE0 225 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 BANF2Q9H503 90 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 ZNF703Q9H7S9 590 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 EHFQ9NZC4 300 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 CLN8Q9UBY8 286 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 A0A087WWC5 75 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 SPAARA0A1B0GVQ0 90 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 LOC107986453A0A1B0GWG9 222 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 MEGF11A6BM72 1044 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 P2RY10O00398 339 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 SRP19P09132 144 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 FSTP19883 344 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 NTF4P34130 210 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 P2RY1P47900 373 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 COL10A1Q03692 680 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 P2RY6Q15077 328 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 DMRTC1Q5HYR2 192 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 WIPI1Q5MNZ9 446 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 NIT1Q86X76 327 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 NABP1Q96AH0 204 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 FGGYQ96C11 551 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 RAX2Q96IS3 184 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 SCGB3A2Q96PL1 93 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 HIST1H2AAQ96QV6 131 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 C1orf123Q9NWV4 160 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 HHLA2Q9UM44 414 aa6.82□□□□□ -1.32
PDLIM5-221ENST00000542407 A0A1B0GU03 582 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 NPIPA3F8WFD2 350 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 CTSDP07339 412 aaPredicted RBP6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 VSIG8P0DPA2 414 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 RPL23AP62750 156 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 HLA-DRB3P79483 266 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 IL15RAQ13261 267 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 SP6Q3SY56 376 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 ATP1A1-AS1Q5TC04 95 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 ZNF66Q6ZN08 573 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 OR13G1Q8NGZ3 307 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 TMEM37Q8WXS4 190 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 CHRDL1Q9BU40 450 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 AK3Q9UIJ7 227 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 JPT1Q9UK76 154 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 OTOGLQ3ZCN5 2332 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 MED12Q93074 2177 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 SOCS1O15524 211 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 TNFSF12O43508 249 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 HPNP05981 417 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 SUMO1P63165 101 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 RELBQ01201 579 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 MMDQ15546 238 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 OR1C1Q15619 314 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 PRSS8Q16651 343 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 TDRG1Q3Y452 100 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 Q6ZVH6 145 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 LYPD6Q86Y78 171 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 C20orf196Q8IYI0 205 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 MDS2Q8NDY4 140 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 MRAP2Q96G30 205 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 FAM173AQ9BQD7 235 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 A0A096LPE4 126 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 A0A1W2PPZ6 126 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 H0Y980 276 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 CLDN34H7C241 214 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 TTRP02766 147 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 H2BFMP0C1H6 154 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 GDF1P27539 372 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 MFAP4P55083 255 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 ENDOGQ14249 297 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 CFHR4Q92496 578 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 ASCL2Q99929 193 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 GINS3Q9BRX5 216 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 GTSF1LQ9H1H1 148 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 ZNF391Q9UJN7 358 aa6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 PHF3Q92576 2039 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-221ENST00000542407 CDS2O95674 445 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 HIST1H3AP68431 136 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 GCSAMLQ5JQS6 135 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 UNQ5815/PRO19632Q6UWF5 114 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 OR10D3Q8NH80 312 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 PLA2G3Q9NZ20 509 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 BOKQ9UMX3 212 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 LAMP3Q9UQV4 416 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 OSGIN2Q9Y236 505 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 NSG2Q9Y328 171 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 A0A1W2PP11 408 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 GAGE12BA1L429 117 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 NKX2-6A6NCS4 301 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 ZNF878C9JN71 531 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 RER1O15258 196 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms