RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 CCL15Q16663 113 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 MS4A18Q3C1V0 323 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 FNDC7Q5VTL7 733 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 FRG2Q64ET8 278 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 ZNF324BQ6AW86 544 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-218ENST00000541615 ASPHD2Q6ICH7 369 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 RASL11AQ6T310 242 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 C17orf99Q6UX52 265 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 C20orf204Q6ZNR8 217 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 Q6ZUT4 128 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 ZNF627Q7L945 461 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 C1QL2Q7Z5L3 287 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 ADGRE4PQ86SQ3 457 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 FBXL14Q8N1E6 418 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 CLDN19Q8N6F1 224 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 RBMXL3Q8N7X1 1067 aaKnown RBP4.43□□□□□ -1.7
SNHG1-218ENST00000541615 TMEM99Q8N816 258 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 OR8B3Q8NGG8 313 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 OR10G8Q8NGN5 311 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 C10orf35Q96D05 121 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 TM4SF19Q96DZ7 209 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 NEURL3Q96EH8 262 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 PELI1Q96FA3 418 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 FRG2BQ96QU4 278 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 OR8B2Q96RD0 313 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 MRPL18Q9H0U6 180 aaKnown RBP4.43□□□□□ -1.7
SNHG1-218ENST00000541615 DEFB129Q9H1M3 183 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 PPDPFQ9H3Y8 114 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 BCL2L10Q9HD36 194 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 BPIFA1Q9NP55 256 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 ZNF581Q9P0T4 197 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 GNG13Q9P2W3 67 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 CLCF1Q9UBD9 225 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 TMED7Q9Y3B3 224 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 LOXL2Q9Y4K0 774 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 LINC00312Q9Y6C7 94 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 ARFGEF1Q9Y6D6 1849 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 CACNA1SQ13698 1873 aa4.43□□□□□ -1.7
SNHG1-218ENST00000541615 A0A087WV48 116 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 TRGV10A0A0A0MS01 117 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 TRBV5-7A0A0A0MS05 114 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 A0A1W2PPI3 338 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 A0A1W2PS18 150 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 OTOL1A6NHN0 477 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-218ENST00000541615 H3BMG7 143 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 H3BUT2 72 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 PLPP3O14495 311 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 PIN1P1O15428 100 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 PRKNO60260 465 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-218ENST00000541615 HSBP1O75506 76 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 TNFRSF6BO95407 300 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 NTF3P20783 257 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 VDAC1P21796 283 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 SRIP30626 198 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 BRCA1P38398 1863 aaKnown RBP4.42□□□□□ -1.7
SNHG1-218ENST00000541615 ADCYAP1R1P41586 468 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 KIR2DS2P43631 304 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 EMP1P54849 157 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 CLDN6P56747 220 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 ZNF121P58317 390 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-218ENST00000541615 RHOAP61586 193 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 RPS4XP62701 263 aaKnown RBP4.42□□□□□ -1.7
SNHG1-218ENST00000541615 CCL20P78556 96 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 TNFAIP6P98066 277 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-218ENST00000541615 CHD3Q12873 2000 aaKnown RBP4.42□□□□□ -1.7
SNHG1-218ENST00000541615 IGFBP7Q16270 282 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 Q6AWC8 147 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 ABHD17CQ6PCB6 329 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 SLC23A3Q6PIS1 610 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 PARM1Q6UWI2 310 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 HFE2Q6ZVN8 426 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 TMEM219Q86XT9 240 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 TMEM25Q86YD3 366 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 CLECL1Q8IZS7 167 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 SHISA5Q8N114 240 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 ZNF611Q8N823 705 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 BCORP1Q8N888 145 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 FAM169BQ8N8A8 192 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 LRTM2Q8N967 370 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 ZFP62Q8NB50 900 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-218ENST00000541615 NUP43Q8NFH3 380 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 OR10J6PQ8NGY7 276 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 KIR2DL5BQ8NHK3 375 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 COQ2Q96H96 371 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 SUSD3Q96L08 255 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 LINC00615Q96LM1 132 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-218ENST00000541615 OR2A5Q96R48 311 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 GFI1Q99684 422 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 SPAG8Q99932 426 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-218ENST00000541615 TMEM204Q9BSN7 226 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 TMEM70Q9BUB7 260 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 PLA2G12AQ9BZM1 189 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 PARP12Q9H0J9 701 aaKnown RBP4.42□□□□□ -1.7
SNHG1-218ENST00000541615 S1PR5Q9H228 398 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 SLC39A9Q9NUM3 307 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 TFCP2L1Q9NZI6 479 aa4.42□□□□□ -1.7
SNHG1-218ENST00000541615 WRAP73Q9P2S5 460 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-218ENST00000541615 TRMT112Q9UI30 125 aaKnown RBP4.42□□□□□ -1.7
SNHG1-218ENST00000541615 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-218ENST00000541615 LSM5Q9Y4Y9 91 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms