RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 ZNF98A6NK75 572 aa13.38□□□□□ -0.27
HMGA2-210ENST00000541363 CEACAM4O75871 244 aa13.38□□□□□ -0.27
HMGA2-210ENST00000541363 ASAH2BP0C7U1 165 aa13.38□□□□□ -0.27
HMGA2-210ENST00000541363 MDKP21741 143 aaPredicted RBP13.38□□□□□ -0.27
HMGA2-210ENST00000541363 INO80CQ6PI98 192 aaPredicted RBP13.38□□□□□ -0.27
HMGA2-210ENST00000541363 WIPI2Q9Y4P8 454 aa13.38□□□□□ -0.27
HMGA2-210ENST00000541363 MVDP53602 400 aa13.38□□□□□ -0.27
HMGA2-210ENST00000541363 OVCH2Q7RTZ1 564 aa13.38□□□□□ -0.27
HMGA2-210ENST00000541363 ANAPC13Q9BS18 74 aa13.38□□□□□ -0.27
HMGA2-210ENST00000541363 KIAA0100Q14667 2235 aaKnown RBP13.38□□□□□ -0.27
HMGA2-210ENST00000541363 METTL12A8MUP2 240 aa13.38□□□□□ -0.27
HMGA2-210ENST00000541363 GPBAR1Q8TDU6 330 aa13.38□□□□□ -0.27
HMGA2-210ENST00000541363 ZNF430Q9H8G1 570 aaPredicted RBP13.38□□□□□ -0.27
HMGA2-210ENST00000541363 ASB1Q9Y576 335 aa13.38□□□□□ -0.27
HMGA2-210ENST00000541363 DNAJC13O75165 2243 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 GPR6P46095 362 aaPredicted RBP13.37□□□□□ -0.27
HMGA2-210ENST00000541363 Q5PR19 223 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 NIT1Q86X76 327 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 SHISA5Q8N114 240 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 SPEM2Q0P670 501 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 ATOH7Q8N100 152 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 TDRD6O60522 2096 aaKnown RBP13.37□□□□□ -0.27
HMGA2-210ENST00000541363 SPTY2D1-AS1A0A0U1RR47 76 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 RCC1P18754 421 aaPredicted RBP13.37□□□□□ -0.27
HMGA2-210ENST00000541363 MAFAQ8NHW3 353 aaPredicted RBP13.37□□□□□ -0.27
HMGA2-210ENST00000541363 PIMREGQ9BSJ6 248 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 OR2H1Q9GZK4 316 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 FRRS1LQ9P0K9 344 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 CKS1BP61024 79 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 SLC25A53Q5H9E4 307 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 SSC5DA1L4H1 1573 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 UNQ5815/PRO19632Q6UWF5 114 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 TIAM2Q8IVF5 1701 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 C16orf97H3BN30 126 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 SSBP4Q9BWG4 385 aaPredicted RBP13.37□□□□□ -0.27
HMGA2-210ENST00000541363 MYO7AQ13402 2215 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 KNDC1Q76NI1 1749 aa13.37□□□□□ -0.27
HMGA2-210ENST00000541363 HBBP68871 147 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 TMEM106BQ9NUM4 274 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 TOMM7Q9P0U1 55 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 MRM2Q9UI43 246 aaKnown RBP13.36□□□□□ -0.27
HMGA2-210ENST00000541363 TNFSF14O43557 240 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 HSPB1P04792 205 aaKnown RBP13.36□□□□□ -0.27
HMGA2-210ENST00000541363 HMGA1P17096 107 aaKnown RBP13.36□□□□□ -0.27
HMGA2-210ENST00000541363 GGTLC2Q14390 218 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 CD300LDQ6UXZ3 194 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 EEF1AKMT3Q96AZ1 226 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 THY1P04216 161 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 RAE1P78406 368 aaKnown RBP13.36□□□□□ -0.27
HMGA2-210ENST00000541363 LHX8Q68G74 356 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 OR11H7Q8NGC8 314 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 MYO16Q9Y6X6 1858 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 SNRPCP09234 159 aaKnown RBP13.36□□□□□ -0.27
HMGA2-210ENST00000541363 CXCL3P19876 107 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 STARD6P59095 220 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 C17orf47Q8NEP4 570 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 DERL1Q9BUN8 251 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 DNAJC4Q9NNZ3 241 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 PLSCR2Q9NRY7 297 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 ARL14EPLP0DKL9 152 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 RPL8P62917 257 aaKnown RBP13.36□□□□□ -0.27
HMGA2-210ENST00000541363 TRIP6Q15654 476 aaKnown RBP13.36□□□□□ -0.27
HMGA2-210ENST00000541363 CHD3Q12873 2000 aaKnown RBP13.36□□□□□ -0.27
HMGA2-210ENST00000541363 DSPPQ9NZW4 1301 aa13.36□□□□□ -0.27
HMGA2-210ENST00000541363 ATP5LO75964 103 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 TMEM50AO95807 157 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 IGHV4-39P01824 125 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 MEF2BQ02080 365 aaPredicted RBP13.35□□□□□ -0.27
HMGA2-210ENST00000541363 FXYD3Q14802 87 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 QTRT1Q9BXR0 403 aaKnown RBP13.35□□□□□ -0.27
HMGA2-210ENST00000541363 OR51M1Q9H341 326 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 DOT1LQ8TEK3 1739 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 TRAV12-3A0A0B4J271 114 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 HCP5Q6MZN7 132 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 CT55Q8WUE5 264 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 SPCS1Q9Y6A9 102 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 TRAV8-4A0A0B4J246 113 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 NDUFS8O00217 210 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 CCL21O00585 134 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 AGAP20933 346 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 LCN2P80188 198 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 PAX2Q02962 417 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 TTC9CQ8N5M4 171 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 H0Y980 276 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 FAM71F2Q6NXP2 309 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 A0A1W2PPE3 182 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 COL16A1Q07092 1604 aaPredicted RBP13.35□□□□□ -0.27
HMGA2-210ENST00000541363 LAMB1P07942 1786 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 ASPDHA6ND91 283 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 C2CD4DB7Z1M9 353 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 MAGEA5P43359 124 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 MAST2Q6P0Q8 1798 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 IGHV5-51A0A0C4DH38 117 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 SPINK2P20155 84 aa13.35□□□□□ -0.27
HMGA2-210ENST00000541363 MBD1Q9UIS9 605 aaPredicted RBP13.34□□□□□ -0.27
HMGA2-210ENST00000541363 CXorf65A6NEN9 183 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 OGG1O15527 345 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 APOMO95445 188 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 ADRA2AP08913 450 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 MUC1P15941 1255 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms