RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 C19orf12Q9NSK7 152 aa11.49□□□□□ -0.57
RTN3-210ENST00000540798 MMP24Q9Y5R2 645 aa11.49□□□□□ -0.57
RTN3-210ENST00000540798 FAM90A26D6RGX4 464 aa11.49□□□□□ -0.57
RTN3-210ENST00000540798 WRBO00258 174 aa11.49□□□□□ -0.57
RTN3-210ENST00000540798 CD40P25942 277 aa11.49□□□□□ -0.57
RTN3-210ENST00000540798 ATP6V0CP27449 155 aa11.49□□□□□ -0.57
RTN3-210ENST00000540798 PPP1CCP36873 323 aaKnown RBP11.49□□□□□ -0.57
RTN3-210ENST00000540798 DVL1P1P54792 670 aaPredicted RBP11.49□□□□□ -0.57
RTN3-210ENST00000540798 TAS2R30P59541 319 aa11.49□□□□□ -0.57
RTN3-210ENST00000540798 TBR1Q16650 682 aa11.49□□□□□ -0.57
RTN3-210ENST00000540798 SP5Q6BEB4 398 aaPredicted RBP11.49□□□□□ -0.57
RTN3-210ENST00000540798 AGMATQ9BSE5 352 aa11.49□□□□□ -0.57
RTN3-210ENST00000540798 ELOVL5Q9NYP7 299 aa11.49□□□□□ -0.57
RTN3-210ENST00000540798 NXPH3O95157 252 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 ADH4P08319 380 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 SULT1A1P50225 295 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 BPIFB3P59826 476 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 FGFRL1Q8N441 504 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 TPRX1Q8N7U7 411 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 ATP5SQ99766 215 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 K7ENP7 123 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 PRRG2O14669 202 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 MGST3O14880 152 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 SYNGR2O43760 224 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 BMP5P22003 454 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 OMGP23515 440 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 RPL23AP62750 156 aaKnown RBP11.48□□□□□ -0.57
RTN3-210ENST00000540798 MIDNQ504T8 468 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 MOGAT3Q86VF5 341 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 NINJ1Q92982 152 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 HIPK2Q9H2X6 1198 aa11.48□□□□□ -0.57
RTN3-210ENST00000540798 C9JQL5 133 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 RAMP3O60896 148 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 CST7O76096 145 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 FHITP49789 147 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 FOXC1Q12948 553 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 ZNF66Q6ZN08 573 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 SSX9Q7RTT3 188 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 ITLN1Q8WWA0 313 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 RNF150Q9ULK6 438 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 ODAMA1E959 279 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 UMAD1C9J7I0 102 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 SPINT2O43291 252 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 ZNF16P17020 682 aaPredicted RBP11.47□□□□□ -0.57
RTN3-210ENST00000540798 GZMHP20718 246 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 S100PP25815 95 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 CAMLGP49069 296 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 CDPF1Q6NVV7 123 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 IL19Q9UHD0 177 aa11.47□□□□□ -0.57
RTN3-210ENST00000540798 A0A1B0GW64 132 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 C1QL1O75973 258 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 TSPAN15O95858 294 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 SMIM6P0DI80 62 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 TMEM182Q6ZP80 229 aaPredicted RBP11.46□□□□□ -0.57
RTN3-210ENST00000540798 RNASE11Q8TAA1 199 aaKnown RBP11.46□□□□□ -0.57
RTN3-210ENST00000540798 Q8TCH9 128 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 GNPNAT1Q96EK6 184 aaPredicted RBP11.46□□□□□ -0.57
RTN3-210ENST00000540798 DCTN5Q9BTE1 182 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 DSCAML1Q8TD84 2053 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 F2RL2O00254 374 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 SPRY3O43610 288 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 CLN5O75503 358 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 IGHV1-46P01743 117 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 SFTA3P0C7M3 94 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 CGB3P0DN86 165 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 CGB7P0DN87 165 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 CATR1Q13166 79 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 CISD2Q8N5K1 135 aaKnown RBP11.46□□□□□ -0.57
RTN3-210ENST00000540798 PPP1R35Q8TAP8 253 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 SCNM1Q9BWG6 230 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 JPT1Q9UK76 154 aa11.46□□□□□ -0.57
RTN3-210ENST00000540798 RAI1Q7Z5J4 1906 aaPredicted RBP11.46□□□□□ -0.58
RTN3-210ENST00000540798 DEFA6Q01524 100 aa11.46□□□□□ -0.58
RTN3-210ENST00000540798 ANKRD39Q53RE8 183 aa11.46□□□□□ -0.58
RTN3-210ENST00000540798 VHLLQ6RSH7 139 aa11.46□□□□□ -0.58
RTN3-210ENST00000540798 HSPB7Q9UBY9 170 aa11.46□□□□□ -0.58
RTN3-210ENST00000540798 RFNGQ9Y644 331 aa11.46□□□□□ -0.58
RTN3-210ENST00000540798 ATMQ13315 3056 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 IGHV3OR15-7A0A075B7D8 119 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 C17orf98A8MV24 154 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 DFFBO76075 338 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 CD80P33681 288 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 LOXL3P58215 753 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 UNQ6494/PRO21346Q6UXR6 183 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 OR2G3Q8NGZ4 309 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 SDSLQ96GA7 329 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 HSD17B10Q99714 261 aaKnown RBP11.45□□□□□ -0.58
RTN3-210ENST00000540798 GCM1Q9NP62 436 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 AGPAT2O15120 278 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 YPEL1O60688 119 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 HAPLN4Q86UW8 402 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 ZNF808Q8N4W9 903 aaPredicted RBP11.45□□□□□ -0.58
RTN3-210ENST00000540798 TMEM217Q8N7C4 229 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 RXFP4Q8TDU9 374 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 YPEL2Q96QA6 119 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 KCNJ16Q9NPI9 418 aa11.45□□□□□ -0.58
RTN3-210ENST00000540798 IGHV3-43A0A0B4J1X8 118 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 LINC00473A8K010 186 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 C16orf97H3BN30 126 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 DSCAMO60469 2012 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms