RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 OR2D2Q9H210 308 aa12.43□□□□□ -0.42
DDB1-218ENST00000540784 PROP1O75360 226 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 TUSC2O75896 110 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 SLC22A5O76082 557 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 IGKV1D-33P01593 117 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 IGKV1-33P01594 117 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 CT45A6P0DMU7 189 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 CT45A5P0DMU8 189 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 CT45A7P0DMV0 189 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 AADACP22760 399 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 HRH1P35367 487 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 TSPAN5P62079 268 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 SSBP1Q04837 148 aaKnown RBP12.42□□□□□ -0.42
DDB1-218ENST00000540784 CNPY1Q3B7I2 92 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 PYDC2Q56P42 97 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 SPANXN2Q5MJ10 180 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 DHRS7BQ6IAN0 325 aaPredicted RBP12.42□□□□□ -0.42
DDB1-218ENST00000540784 CCDC190Q86UF4 302 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 OR6F1Q8NGZ6 308 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 OR2T10Q8NGZ9 312 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 SMIM4Q8WVI0 70 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 RBM14Q96PK6 669 aaKnown RBP12.42□□□□□ -0.42
DDB1-218ENST00000540784 C19orf24Q9BVV8 132 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 SDHAF2Q9NX18 166 aa12.42□□□□□ -0.42
DDB1-218ENST00000540784 M0R1X1 148 aa12.41□□□□□ -0.42
DDB1-218ENST00000540784 GSTZ1O43708 216 aaPredicted RBP12.41□□□□□ -0.42
DDB1-218ENST00000540784 MOSP00540 346 aa12.41□□□□□ -0.42
DDB1-218ENST00000540784 PPYP01298 95 aa12.41□□□□□ -0.42
DDB1-218ENST00000540784 IFNA6P05013 189 aa12.41□□□□□ -0.42
DDB1-218ENST00000540784 HKR1P10072 659 aa12.41□□□□□ -0.42
DDB1-218ENST00000540784 TMEM11P17152 192 aa12.41□□□□□ -0.42
DDB1-218ENST00000540784 PTBP1P26599 531 aaKnown RBP eCLIP12.41□□□□□ -0.42
DDB1-218ENST00000540784 MC5RP33032 325 aa12.41□□□□□ -0.42
DDB1-218ENST00000540784 EBI3Q14213 229 aa12.41□□□□□ -0.42
DDB1-218ENST00000540784 ACTBL2Q562R1 376 aa12.41□□□□□ -0.42
DDB1-218ENST00000540784 C16orf82Q7Z2V1 217 aa12.41□□□□□ -0.42
DDB1-218ENST00000540784 TMEM229BQ8NBD8 167 aa12.41□□□□□ -0.42
DDB1-218ENST00000540784 DRAXINQ8NBI3 349 aaPredicted RBP12.41□□□□□ -0.42
DDB1-218ENST00000540784 EAF1Q96JC9 268 aaPredicted RBP12.41□□□□□ -0.42
DDB1-218ENST00000540784 AKR1E2Q96JD6 320 aa12.41□□□□□ -0.42
DDB1-218ENST00000540784 C1RLQ9NZP8 487 aa12.41□□□□□ -0.42
DDB1-218ENST00000540784 IGKV1D-13A0A0B4J2D9 117 aa12.4□□□□□ -0.42
DDB1-218ENST00000540784 CHST1O43916 411 aa12.4□□□□□ -0.42
DDB1-218ENST00000540784 OR2F2O95006 317 aa12.4□□□□□ -0.42
DDB1-218ENST00000540784 CD3DP04234 171 aa12.4□□□□□ -0.42
DDB1-218ENST00000540784 IGKV1-13P0DP09 117 aa12.4□□□□□ -0.42
DDB1-218ENST00000540784 ETV6P41212 452 aa12.4□□□□□ -0.42
DDB1-218ENST00000540784 TAS2R19P59542 299 aa12.4□□□□□ -0.42
DDB1-218ENST00000540784 HERV-K104P61576 105 aa12.4□□□□□ -0.42
DDB1-218ENST00000540784 LSAMPQ13449 338 aa12.4□□□□□ -0.42
DDB1-218ENST00000540784 GLDNQ6ZMI3 551 aaPredicted RBP12.4□□□□□ -0.42
DDB1-218ENST00000540784 ZNF645Q8N7E2 425 aa12.4□□□□□ -0.42
DDB1-218ENST00000540784 TAF15Q92804 592 aaKnown RBP eCLIP12.4□□□□□ -0.42
DDB1-218ENST00000540784 MDFIQ99750 246 aa12.4□□□□□ -0.42
DDB1-218ENST00000540784 ZNF2Q9BSG1 426 aaPredicted RBP12.4□□□□□ -0.42
DDB1-218ENST00000540784 SLC25A33Q9BSK2 321 aa12.4□□□□□ -0.42
DDB1-218ENST00000540784 THAP7Q9BT49 309 aaPredicted RBP12.4□□□□□ -0.42
DDB1-218ENST00000540784 NPFFR1Q9GZQ6 430 aa12.4□□□□□ -0.42
DDB1-218ENST00000540784 SLC5A7Q9GZV3 580 aa12.4□□□□□ -0.42
DDB1-218ENST00000540784 TAS2R8Q9NYW2 309 aa12.4□□□□□ -0.42
DDB1-218ENST00000540784 ZNF107Q9UII5 783 aaPredicted RBP12.4□□□□□ -0.42
DDB1-218ENST00000540784 TMEM89A2RUT3 159 aa12.39□□□□□ -0.43
DDB1-218ENST00000540784 H7C2Y5 167 aa12.39□□□□□ -0.43
DDB1-218ENST00000540784 M0QYG6 137 aa12.39□□□□□ -0.43
DDB1-218ENST00000540784 CSF1P09603 554 aa12.39□□□□□ -0.43
DDB1-218ENST00000540784 TBPP20226 339 aa12.39□□□□□ -0.43
DDB1-218ENST00000540784 LINC00205P59089 165 aa12.39□□□□□ -0.43
DDB1-218ENST00000540784 FXYD4P59646 89 aa12.39□□□□□ -0.43
DDB1-218ENST00000540784 RNASE10Q5GAN6 216 aaKnown RBP12.39□□□□□ -0.43
DDB1-218ENST00000540784 VAX1Q5SQQ9 334 aa12.39□□□□□ -0.43
DDB1-218ENST00000540784 ZNF660Q6AZW8 331 aaPredicted RBP12.39□□□□□ -0.43
DDB1-218ENST00000540784 TMEM17Q86X19 198 aa12.39□□□□□ -0.43
DDB1-218ENST00000540784 OR5AN1Q8NGI8 311 aa12.39□□□□□ -0.43
DDB1-218ENST00000540784 SECTM1Q8WVN6 248 aa12.39□□□□□ -0.43
DDB1-218ENST00000540784 RBMX2Q9Y388 322 aaKnown RBP12.39□□□□□ -0.43
DDB1-218ENST00000540784 V9GYH0 126 aa12.39□□□□□ -0.43
DDB1-218ENST00000540784 OR5H14A6NHG9 310 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 NCBP2LA6PVI3 153 aaKnown RBP12.38□□□□□ -0.43
DDB1-218ENST00000540784 H0YJW9 148 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 M0QZK8 103 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 NDUFA7O95182 113 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 RAB3DO95716 219 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 THBS3P49746 956 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 RAG2P55895 527 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 TAGLNQ01995 201 aaKnown RBP12.38□□□□□ -0.43
DDB1-218ENST00000540784 FOXL1Q12952 345 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 FBLN7Q53RD9 439 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 STEAP1BQ6NZ63 245 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 Q8N402 240 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 ZNF383Q8NA42 475 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 OR4C13Q8NGP0 309 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 OR4F5Q8NH21 305 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 ADTRPQ96IZ2 230 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 TINAGL1Q9GZM7 467 aaPredicted RBP12.38□□□□□ -0.43
DDB1-218ENST00000540784 PRSS22Q9GZN4 317 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 CCL28Q9NRJ3 127 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 WASHC3Q9Y3C0 194 aa12.38□□□□□ -0.43
DDB1-218ENST00000540784 FBN1P35555 2871 aaKnown RBP12.37□□□□□ -0.43
DDB1-218ENST00000540784 TSPAN9O75954 239 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 APOA2P02652 100 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms