RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 EFNA4P52798 201 aa20.14■□□□□ 0.81
TTC3-225ENST00000540756 ZNF816Q0VGE8 651 aaPredicted RBP20.14■□□□□ 0.81
TTC3-225ENST00000540756 NCR3LG1Q68D85 454 aa20.14■□□□□ 0.81
TTC3-225ENST00000540756 TMUB2Q71RG4 321 aa20.14■□□□□ 0.81
TTC3-225ENST00000540756 C11orf42Q8N5U0 333 aa20.14■□□□□ 0.81
TTC3-225ENST00000540756 OR1S1Q8NH92 325 aa20.14■□□□□ 0.81
TTC3-225ENST00000540756 DCUN1D4Q92564 292 aa20.14■□□□□ 0.81
TTC3-225ENST00000540756 FBN2P35556 2912 aa20.13■□□□□ 0.81
TTC3-225ENST00000540756 IGKV1-5P01602 117 aa20.13■□□□□ 0.81
TTC3-225ENST00000540756 VDAC1P21796 283 aa20.13■□□□□ 0.81
TTC3-225ENST00000540756 PRB3Q04118 309 aaPredicted RBP20.13■□□□□ 0.81
TTC3-225ENST00000540756 TLE4Q04727 773 aa20.13■□□□□ 0.81
TTC3-225ENST00000540756 LSM5Q9Y4Y9 91 aaKnown RBP20.13■□□□□ 0.81
TTC3-225ENST00000540756 TENM4Q6N022 2769 aa20.13■□□□□ 0.81
TTC3-225ENST00000540756 SAA2-SAA4A0A096LPE2 208 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 M0R1X1 148 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 NXPH3O95157 252 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 SAA2P0DJI9 122 aaPredicted RBP20.12■□□□□ 0.81
TTC3-225ENST00000540756 EPHA1P21709 976 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 DUTP33316 252 aaKnown RBP20.12■□□□□ 0.81
TTC3-225ENST00000540756 LPAR6P43657 344 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 TMEM33P57088 247 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 OPCMLQ14982 345 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 WDR25Q64LD2 544 aaPredicted RBP20.12■□□□□ 0.81
TTC3-225ENST00000540756 Q6ZRM9 215 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 LYG1Q8N1E2 194 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 ZNF525Q8N782 197 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 IGFBPL1Q8WX77 278 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 IL22RA2Q969J5 263 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 ARL6Q9H0F7 186 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 RNF212BA8MTL3 300 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 MSMO1Q15800 293 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 PRSS54Q6PEW0 395 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 SPAG16Q8N0X2 631 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 OR8B3Q8NGG8 313 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 OR4D5Q8NGN0 318 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 GPR146Q96CH1 333 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 NEIL1Q96FI4 390 aaPredicted RBP20.12■□□□□ 0.81
TTC3-225ENST00000540756 OR8B2Q96RD0 313 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 GON7Q9BXV9 100 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 MIOXQ9UGB7 285 aa20.12■□□□□ 0.81
TTC3-225ENST00000540756 MAP1AP78559 2803 aaPredicted RBP20.12■□□□□ 0.81
TTC3-225ENST00000540756 MSGN1A6NI15 193 aa20.11■□□□□ 0.81
TTC3-225ENST00000540756 B3GALNT1O75752 331 aa20.11■□□□□ 0.81
TTC3-225ENST00000540756 HSD17B10Q99714 261 aaKnown RBP20.11■□□□□ 0.81
TTC3-225ENST00000540756 ZNF251Q9BRH9 671 aa20.11■□□□□ 0.81
TTC3-225ENST00000540756 LPAR3Q9UBY5 353 aa20.11■□□□□ 0.81
TTC3-225ENST00000540756 ITGB1BP1O14713 200 aa20.1■□□□□ 0.81
TTC3-225ENST00000540756 RAB7AP51149 207 aa20.1■□□□□ 0.81
TTC3-225ENST00000540756 ZNF66Q6ZN08 573 aa20.1■□□□□ 0.81
TTC3-225ENST00000540756 SLC25A48Q6ZT89 311 aaKnown RBP20.1■□□□□ 0.81
TTC3-225ENST00000540756 SLA2Q9H6Q3 261 aa20.1■□□□□ 0.81
TTC3-225ENST00000540756 K7EPK0 472 aa20.1■□□□□ 0.81
TTC3-225ENST00000540756 S1PR2O95136 353 aa20.1■□□□□ 0.81
TTC3-225ENST00000540756 S100A11P31949 105 aa20.1■□□□□ 0.81
TTC3-225ENST00000540756 GPR6P46095 362 aaPredicted RBP20.1■□□□□ 0.81
TTC3-225ENST00000540756 CATR1Q13166 79 aa20.1■□□□□ 0.81
TTC3-225ENST00000540756 CXorf66Q5JRM2 361 aaPredicted RBP20.1■□□□□ 0.81
TTC3-225ENST00000540756 FAM71E2Q8N5Q1 922 aa20.1■□□□□ 0.81
TTC3-225ENST00000540756 USP9YO00507 2555 aaPredicted RBP20.1■□□□□ 0.81
TTC3-225ENST00000540756 TRBV23-1A0A0A0MS06 115 aa20.09■□□□□ 0.81
TTC3-225ENST00000540756 DUXBA0A1W2PPF3 345 aa20.09■□□□□ 0.81
TTC3-225ENST00000540756 C22orf46C9J442 243 aa20.09■□□□□ 0.81
TTC3-225ENST00000540756 RGS13O14921 159 aa20.09■□□□□ 0.81
TTC3-225ENST00000540756 IGHV4-39P01824 125 aa20.09■□□□□ 0.81
TTC3-225ENST00000540756 LYL1P12980 280 aa20.09■□□□□ 0.81
TTC3-225ENST00000540756 NRGNQ92686 78 aa20.09■□□□□ 0.81
TTC3-225ENST00000540756 DEDDO75618 318 aa20.09■□□□□ 0.81
TTC3-225ENST00000540756 SP5Q6BEB4 398 aaPredicted RBP20.09■□□□□ 0.81
TTC3-225ENST00000540756 OR10A7Q8NGE5 316 aa20.09■□□□□ 0.81
TTC3-225ENST00000540756 PATZ1Q9HBE1 687 aaKnown RBP20.09■□□□□ 0.81
TTC3-225ENST00000540756 RAB29O14966 203 aa20.08■□□□□ 0.8
TTC3-225ENST00000540756 CFDP00746 253 aaPredicted RBP20.08■□□□□ 0.8
TTC3-225ENST00000540756 KRASP01116 189 aa20.08■□□□□ 0.8
TTC3-225ENST00000540756 IGHV1-8P0DP01 117 aa20.08■□□□□ 0.8
TTC3-225ENST00000540756 G6PCP35575 357 aa20.08■□□□□ 0.8
TTC3-225ENST00000540756 AKR1C2P52895 323 aa20.08■□□□□ 0.8
TTC3-225ENST00000540756 ACOT7LQ6ZUV0 252 aa20.08■□□□□ 0.8
TTC3-225ENST00000540756 RNASE11Q8TAA1 199 aaKnown RBP20.08■□□□□ 0.8
TTC3-225ENST00000540756 CCL19Q99731 98 aa20.08■□□□□ 0.8
TTC3-225ENST00000540756 PPIAL4CA0A0B4J2A2 164 aa20.07■□□□□ 0.8
TTC3-225ENST00000540756 PPIAL4GP0DN37 164 aa20.07■□□□□ 0.8
TTC3-225ENST00000540756 OR8H1Q8NGG4 311 aa20.07■□□□□ 0.8
TTC3-225ENST00000540756 MAGT1Q9H0U3 335 aa20.07■□□□□ 0.8
TTC3-225ENST00000540756 CLEC18AA5D8T8 446 aa20.07■□□□□ 0.8
TTC3-225ENST00000540756 FCGR3BO75015 233 aa20.07■□□□□ 0.8
TTC3-225ENST00000540756 GOSR1O95249 250 aa20.07■□□□□ 0.8
TTC3-225ENST00000540756 COL8A1P27658 744 aa20.07■□□□□ 0.8
TTC3-225ENST00000540756 TMEM30BQ3MIR4 351 aa20.07■□□□□ 0.8
TTC3-225ENST00000540756 INO80EQ8NBZ0 244 aaPredicted RBP20.07■□□□□ 0.8
TTC3-225ENST00000540756 CLEC18CQ8NCF0 446 aa20.07■□□□□ 0.8
TTC3-225ENST00000540756 FAM216AQ8WUB2 273 aa20.07■□□□□ 0.8
TTC3-225ENST00000540756 CACNG5Q9UF02 275 aa20.07■□□□□ 0.8
TTC3-225ENST00000540756 RCL1Q9Y2P8 373 aaKnown RBP20.07■□□□□ 0.8
TTC3-225ENST00000540756 POLR2GP62487 172 aaKnown RBP eCLIP20.06■□□□□ 0.8
TTC3-225ENST00000540756 GNB2P62879 340 aa20.06■□□□□ 0.8
TTC3-225ENST00000540756 KCNRGQ8N5I3 272 aa20.06■□□□□ 0.8
TTC3-225ENST00000540756 THOC7Q6I9Y2 204 aaKnown RBP20.05■□□□□ 0.8
TTC3-225ENST00000540756 GAB2Q9UQC2 676 aa20.05■□□□□ 0.8
TTC3-225ENST00000540756 F5H0A9 414 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms