RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 CLEC12BQ2HXU8 276 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 HLA-DRB5Q30154 266 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 CDKL4Q5MAI5 379 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 DRAM2Q6UX65 266 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 FAM19A3Q7Z5A8 133 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 RIBC1Q8N443 379 aaPredicted RBP0.85□□□□□ -2.27
MDM2-227ENST00000540709 OR4X2Q8NGF9 303 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 OR5D18Q8NGL1 313 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 OR9I1Q8NGQ6 314 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 LHFPL5Q8TAF8 219 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 STOML3Q8TAV4 291 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 PPP1R14BQ96C90 147 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 MGLLQ99685 303 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 PRSS27Q9BQR3 290 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 HSPB9Q9BQS6 159 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 ZNF426Q9BUY5 554 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 TIPINQ9BVW5 301 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 UGT2B28Q9BY64 529 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 CHST5Q9GZS9 411 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 PARVGQ9HBI0 331 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 IMP3Q9NV31 184 aaKnown RBP0.85□□□□□ -2.27
MDM2-227ENST00000540709 PLEKHJ1Q9NW61 149 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 USE1Q9NZ43 259 aa0.85□□□□□ -2.27
MDM2-227ENST00000540709 KIAA0232Q92628 1395 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 RGS12O14924 1447 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 LAMB2P55268 1798 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 IGHV3-73A0A0B4J1V6 119 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 IGKV1-12A0A0C4DH73 117 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 TINCRA0A1B0GVN0 87 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 DHRS12A0PJE2 317 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 SMIM23A6NLE4 172 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 C8orf87E5RJ46 101 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 H3BSA7 217 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 M0QZ92 97 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 UBFD1O14562 309 aaKnown RBP0.84□□□□□ -2.27
MDM2-227ENST00000540709 AZIN1O14977 448 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 SLC16A4O15374 487 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 E2F6O75461 281 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 STK16O75716 305 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 IGKV1D-12P01611 117 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 HBZP02008 142 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 TNNC2P02585 160 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 LINC00614P0C842 121 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 IGHV3-30-3P0DP02 117 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 SLC25A16P16260 332 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 HIST1H1CP16403 213 aaKnown RBP0.84□□□□□ -2.27
MDM2-227ENST00000540709 ALOX5APP20292 161 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 GADD45AP24522 165 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 IFNGR2P38484 337 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 CDK9P50750 372 aaKnown RBP0.84□□□□□ -2.27
MDM2-227ENST00000540709 RPL14P50914 215 aaKnown RBP0.84□□□□□ -2.27
MDM2-227ENST00000540709 FAM3AP98173 230 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 SKP2Q13309 424 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 C4orf26Q17RF5 130 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 TBC1D28Q2M2D7 210 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 FAM229BQ4G0N7 80 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 CCDC122Q5T0U0 273 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 HENMT1Q5T8I9 393 aaKnown RBP0.84□□□□□ -2.27
MDM2-227ENST00000540709 OGFRL1Q5TC84 451 aaPredicted RBP0.84□□□□□ -2.27
MDM2-227ENST00000540709 HES3Q5TGS1 186 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 CST9Q5W186 159 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 MTERF4Q7Z6M4 381 aaKnown RBP0.84□□□□□ -2.27
MDM2-227ENST00000540709 SLC51BQ86UW2 128 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 OR5K1Q8NHB7 308 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 TESCQ96BS2 214 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 PPCDCQ96CD2 204 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 PACRGQ96M98 296 aaPredicted RBP0.84□□□□□ -2.27
MDM2-227ENST00000540709 KCTD7Q96MP8 289 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 HBEGFQ99075 208 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 MROQ9BYG7 248 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 MRPS26Q9BYN8 205 aaKnown RBP0.84□□□□□ -2.27
MDM2-227ENST00000540709 DERL2Q9GZP9 239 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 OR51B6Q9H340 312 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 C11orf49Q9H6J7 331 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 PARVAQ9NVD7 372 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 BABAM2Q9NXR7 383 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 TMEM216Q9P0N5 145 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 LINC00527Q9UJ94 153 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 DNAJC12Q9UKB3 198 aa0.84□□□□□ -2.27
MDM2-227ENST00000540709 CACNA1SQ13698 1873 aa0.84□□□□□ -2.28
MDM2-227ENST00000540709 MPDZO75970 2070 aa0.84□□□□□ -2.28
MDM2-227ENST00000540709 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
MDM2-227ENST00000540709 ADCY9O60503 1353 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 YLPM1P49750 1951 aaKnown RBP0.83□□□□□ -2.28
MDM2-227ENST00000540709 GRIFINA4D1Z8 144 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 LRRN3E7EW58 273 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 F5H768 121 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 H3BPC8 53 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 J3QQQ9 107 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 M0QYV0 167 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 BIRC5O15392 142 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 SYNGR1O43759 233 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 EPPINO95925 133 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 SOD1P00441 154 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 CALB1P05937 261 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 OR13C7P0DN81 318 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 COX5BP10606 129 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 RPS12P25398 132 aaKnown RBP0.83□□□□□ -2.28
MDM2-227ENST00000540709 MAGEA12P43365 314 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 PSMB3P49720 205 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms