RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 IER3P46695 156 aa13.4□□□□□ -0.26
UBC-208ENST00000540700 TAS2R46P59540 309 aa13.4□□□□□ -0.26
UBC-208ENST00000540700 SSBP1Q04837 148 aaKnown RBP13.4□□□□□ -0.26
UBC-208ENST00000540700 ZNF816Q0VGE8 651 aaPredicted RBP13.4□□□□□ -0.26
UBC-208ENST00000540700 KLF9Q13886 244 aaPredicted RBP13.4□□□□□ -0.26
UBC-208ENST00000540700 DHRS11Q6UWP2 260 aa13.4□□□□□ -0.26
UBC-208ENST00000540700 LINC00299Q6ZSB3 139 aa13.4□□□□□ -0.26
UBC-208ENST00000540700 GIMAP1Q8WWP7 306 aa13.4□□□□□ -0.26
UBC-208ENST00000540700 TAF15Q92804 592 aaKnown RBP eCLIP13.4□□□□□ -0.26
UBC-208ENST00000540700 TOMM40LQ969M1 308 aa13.4□□□□□ -0.26
UBC-208ENST00000540700 RPEQ96AT9 228 aa13.4□□□□□ -0.26
UBC-208ENST00000540700 MRPL20Q9BYC9 149 aaKnown RBP13.4□□□□□ -0.26
UBC-208ENST00000540700 OR2D2Q9H210 308 aa13.4□□□□□ -0.26
UBC-208ENST00000540700 NBEAL2Q6ZNJ1 2754 aa13.4□□□□□ -0.26
UBC-208ENST00000540700 IGHV3-72A0A0B4J1Y9 119 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 IGHV1-3A0A0C4DH29 117 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 DNAJC9-AS1A6NH13 148 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 VGLL3A8MV65 326 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 TIMM23O14925 209 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 PPYP01298 95 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 RAB7AP51149 207 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 TAS2R19P59542 299 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 SLC9A3R2Q15599 337 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 STEAP1BQ6NZ63 245 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 CCBE1Q6UXH8 406 aaPredicted RBP13.39□□□□□ -0.27
UBC-208ENST00000540700 OR4C16Q8NGL9 310 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 ZDHHC16Q969W1 377 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 MRGPRFQ96AM1 343 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 SSX3Q99909 188 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 NABP2Q9BQ15 211 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 ZNF2Q9BSG1 426 aaPredicted RBP13.39□□□□□ -0.27
UBC-208ENST00000540700 TNFRSF19Q9NS68 423 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 SDHAF2Q9NX18 166 aa13.39□□□□□ -0.27
UBC-208ENST00000540700 ZNF107Q9UII5 783 aaPredicted RBP13.39□□□□□ -0.27
UBC-208ENST00000540700 OR5H14A6NHG9 310 aa13.38□□□□□ -0.27
UBC-208ENST00000540700 H3BUX3 64 aa13.38□□□□□ -0.27
UBC-208ENST00000540700 CT45A6P0DMU7 189 aa13.38□□□□□ -0.27
UBC-208ENST00000540700 CT45A5P0DMU8 189 aa13.38□□□□□ -0.27
UBC-208ENST00000540700 CT45A7P0DMV0 189 aa13.38□□□□□ -0.27
UBC-208ENST00000540700 ZNF45Q02386 682 aa13.38□□□□□ -0.27
UBC-208ENST00000540700 BAMBIQ13145 260 aa13.38□□□□□ -0.27
UBC-208ENST00000540700 LRRC75BQ2VPJ9 315 aa13.38□□□□□ -0.27
UBC-208ENST00000540700 AADACL3Q5VUY0 350 aa13.38□□□□□ -0.27
UBC-208ENST00000540700 DRAM1Q8N682 238 aa13.38□□□□□ -0.27
UBC-208ENST00000540700 GDPD1Q8N9F7 314 aa13.38□□□□□ -0.27
UBC-208ENST00000540700 OR56B4Q8NH76 319 aa13.38□□□□□ -0.27
UBC-208ENST00000540700 MOB3AQ96BX8 217 aa13.38□□□□□ -0.27
UBC-208ENST00000540700 GPHA2Q96T91 129 aa13.38□□□□□ -0.27
UBC-208ENST00000540700 PIPOXQ9P0Z9 390 aa13.38□□□□□ -0.27
UBC-208ENST00000540700 FAM90A9PA6NNJ1 464 aa13.37□□□□□ -0.27
UBC-208ENST00000540700 OOSP1A8MZH6 123 aa13.37□□□□□ -0.27
UBC-208ENST00000540700 RAB29O14966 203 aa13.37□□□□□ -0.27
UBC-208ENST00000540700 RAB3DO95716 219 aa13.37□□□□□ -0.27
UBC-208ENST00000540700 CSF1P09603 554 aa13.37□□□□□ -0.27
UBC-208ENST00000540700 IL3RAP26951 378 aa13.37□□□□□ -0.27
UBC-208ENST00000540700 CEACAM3P40198 252 aa13.37□□□□□ -0.27
UBC-208ENST00000540700 GPR12P47775 334 aa13.37□□□□□ -0.27
UBC-208ENST00000540700 LUMP51884 338 aaPredicted RBP13.37□□□□□ -0.27
UBC-208ENST00000540700 FXYD4P59646 89 aa13.37□□□□□ -0.27
UBC-208ENST00000540700 EIF4EBP1Q13541 118 aaPredicted RBP13.37□□□□□ -0.27
UBC-208ENST00000540700 HABP2Q14520 560 aaPredicted RBP13.37□□□□□ -0.27
UBC-208ENST00000540700 ACTBL2Q562R1 376 aa13.37□□□□□ -0.27
UBC-208ENST00000540700 RNASE10Q5GAN6 216 aaKnown RBP13.37□□□□□ -0.27
UBC-208ENST00000540700 GLDNQ6ZMI3 551 aaPredicted RBP13.37□□□□□ -0.27
UBC-208ENST00000540700 LHFPL1Q86WI0 220 aa13.37□□□□□ -0.27
UBC-208ENST00000540700 TGIF2LXQ8IUE1 241 aa13.37□□□□□ -0.27
UBC-208ENST00000540700 DRAXINQ8NBI3 349 aaPredicted RBP13.37□□□□□ -0.27
UBC-208ENST00000540700 CCL28Q9NRJ3 127 aa13.37□□□□□ -0.27
UBC-208ENST00000540700 GAB2Q9UQC2 676 aa13.37□□□□□ -0.27
UBC-208ENST00000540700 WNK1Q9H4A3 2382 aa13.37□□□□□ -0.27
UBC-208ENST00000540700 GAPDHP04406 335 aaKnown RBP13.36□□□□□ -0.27
UBC-208ENST00000540700 IL7P13232 177 aa13.36□□□□□ -0.27
UBC-208ENST00000540700 TBPP20226 339 aa13.36□□□□□ -0.27
UBC-208ENST00000540700 DYNLT3P51808 116 aa13.36□□□□□ -0.27
UBC-208ENST00000540700 LY6EQ16553 131 aa13.36□□□□□ -0.27
UBC-208ENST00000540700 FAM71F2Q6NXP2 309 aa13.36□□□□□ -0.27
UBC-208ENST00000540700 TMEM17Q86X19 198 aa13.36□□□□□ -0.27
UBC-208ENST00000540700 OR8H3Q8N146 312 aa13.36□□□□□ -0.27
UBC-208ENST00000540700 ZNF645Q8N7E2 425 aa13.36□□□□□ -0.27
UBC-208ENST00000540700 SECTM1Q8WVN6 248 aa13.36□□□□□ -0.27
UBC-208ENST00000540700 CHIAQ9BZP6 476 aa13.36□□□□□ -0.27
UBC-208ENST00000540700 A6NDX4 124 aa13.35□□□□□ -0.27
UBC-208ENST00000540700 M0R1X1 148 aa13.35□□□□□ -0.27
UBC-208ENST00000540700 CHST1O43916 411 aa13.35□□□□□ -0.27
UBC-208ENST00000540700 AMY2AP04746 511 aa13.35□□□□□ -0.27
UBC-208ENST00000540700 SNRNP70P08621 437 aaKnown RBP13.35□□□□□ -0.27
UBC-208ENST00000540700 AKAIN1P0CW23 69 aa13.35□□□□□ -0.27
UBC-208ENST00000540700 RPL30P62888 115 aaKnown RBP13.35□□□□□ -0.27
UBC-208ENST00000540700 LSAMPQ13449 338 aa13.35□□□□□ -0.27
UBC-208ENST00000540700 AANATQ16613 207 aa13.35□□□□□ -0.27
UBC-208ENST00000540700 ZNF818PQ6ZRF7 136 aa13.35□□□□□ -0.27
UBC-208ENST00000540700 MOB3BQ86TA1 216 aa13.35□□□□□ -0.27
UBC-208ENST00000540700 TMEM219Q86XT9 240 aa13.35□□□□□ -0.27
UBC-208ENST00000540700 ZNF383Q8NA42 475 aa13.35□□□□□ -0.27
UBC-208ENST00000540700 OR13C8Q8NGS7 320 aa13.35□□□□□ -0.27
UBC-208ENST00000540700 OR6F1Q8NGZ6 308 aa13.35□□□□□ -0.27
UBC-208ENST00000540700 SSMEM1Q8WWF3 244 aa13.35□□□□□ -0.27
UBC-208ENST00000540700 HRASLSQ9HDD0 168 aa13.35□□□□□ -0.27
UBC-208ENST00000540700 ZNF221Q9UK13 617 aa13.35□□□□□ -0.27
UBC-208ENST00000540700 TCF19Q9Y242 345 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 186.4 ms