RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 SCAND1P57086 179 aa6.97□□□□□ -1.29
TRAPPC1-202ENST00000540486 Q3ZCU0 254 aa6.97□□□□□ -1.29
TRAPPC1-202ENST00000540486 LY6G6FQ5SQ64 297 aa6.97□□□□□ -1.29
TRAPPC1-202ENST00000540486 STEAP3Q658P3 488 aa6.97□□□□□ -1.29
TRAPPC1-202ENST00000540486 SLC25A46Q96AG3 418 aa6.97□□□□□ -1.29
TRAPPC1-202ENST00000540486 PARP12Q9H0J9 701 aaKnown RBP6.97□□□□□ -1.29
TRAPPC1-202ENST00000540486 CHMP1AQ9HD42 196 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC1-202ENST00000540486 C12orf4Q9NQ89 552 aa6.97□□□□□ -1.29
TRAPPC1-202ENST00000540486 RHBDL2Q9NX52 303 aa6.97□□□□□ -1.29
TRAPPC1-202ENST00000540486 ABRACLQ9P1F3 81 aa6.97□□□□□ -1.29
TRAPPC1-202ENST00000540486 GNG12Q9UBI6 72 aa6.97□□□□□ -1.29
TRAPPC1-202ENST00000540486 JPT1Q9UK76 154 aa6.97□□□□□ -1.29
TRAPPC1-202ENST00000540486 SERPINE3A8MV23 424 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 OOSP1A8MZH6 123 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 TRDCB7Z8K6 153 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 SSX5O60225 188 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 PROP1O75360 226 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 FCGR3AP08637 254 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 CD3GP09693 182 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 SLC6A1P30531 599 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 BRS3P32247 399 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 CEACAM3P40198 252 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 CEACAM6P40199 344 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 REG1BP48304 166 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 ZNF137PP52743 207 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 BLCAPP62952 87 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 HLA-DRB3P79483 266 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 ZNF816Q0VGE8 651 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 MADCAM1Q13477 382 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 TMEM30BQ3MIR4 351 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 IGSF11Q5DX21 431 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 HACD4Q5VWC8 232 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 ETV3LQ6ZN32 361 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 GPR141Q7Z602 305 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 TMEM219Q86XT9 240 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 THNSL2Q86YJ6 484 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 CROCCP3Q8IVE0 287 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 IZUMO1Q8IYV9 350 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 DRAM1Q8N682 238 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 OR10X1Q8NGY0 326 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 IL1F10Q8WWZ1 152 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 MAFIPQ8WZ33 124 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 TOMM40LQ969M1 308 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 RPEQ96AT9 228 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 ZNF251Q9BRH9 671 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 AGMATQ9BSE5 352 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 ABCG5Q9H222 651 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 RAB9BQ9NP90 201 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 ABCB10Q9NRK6 738 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 OR1A1Q9P1Q5 309 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 AMMECR1Q9Y4X0 333 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 ETV7Q9Y603 341 aa6.96□□□□□ -1.3
TRAPPC1-202ENST00000540486 HECTD4Q9Y4D8 3996 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 TRAV18A0A075B6X5 111 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 IGHV1-3A0A0C4DH29 117 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 TMEM235A6NFC5 223 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 ZNF736B4DX44 427 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 HSD17B6O14756 317 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 GAPDHP04406 335 aaKnown RBP6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 AMY1AP04745 511 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 AMY2AP04746 511 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 PTHLHP12272 177 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 MYCNOSP40205 109 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 MNDAP41218 407 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 ECI1P42126 302 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 RPL5P46777 297 aaKnown RBP6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 RAB7AP51149 207 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 ARFRP1Q13795 201 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 EBI3Q14213 229 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 SRSF7Q16629 238 aaKnown RBP eCLIP6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 KHDC1LQ5JSQ8 128 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 XP32Q5T750 250 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 MOB1BQ7L9L4 216 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 RTN4IP1Q8WWV3 396 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 TOLLIPQ9H0E2 274 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 C11orf54Q9H0W9 315 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 DCSTAMPQ9H295 470 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 SLC23A1Q9UHI7 598 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 MGAT4AQ9UM21 535 aa6.95□□□□□ -1.3
TRAPPC1-202ENST00000540486 TRBV6-7A0A0A0MS04 114 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 IGHV3-72A0A0B4J1Y9 119 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 ITGB1BP1O14713 200 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 RGS13O14921 159 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 FABP7O15540 132 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 SLC25A17O43808 307 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 SCGNO76038 276 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 RGS11O94810 467 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 EIF4EP06730 217 aaKnown RBP6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 SNRNP70P08621 437 aaKnown RBP6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 DTYMKP23919 212 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 ZBTB25P24278 435 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 OR3A3P47888 321 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 RORCP51449 518 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 SPCS2Q15005 226 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 ARL6IP1Q15041 203 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 PNLIPRP3Q17RR3 467 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 TMEM95Q3KNT9 176 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 C9orf66Q5T8R8 295 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 CCDC144NLQ6NUI1 221 aa6.94□□□□□ -1.3
TRAPPC1-202ENST00000540486 Q6ZS49 121 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms