RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 CDIPTO14735 213 aa11.14□□□□□ -0.63
DNMT1-203ENST00000540357 SYNGR1O43759 233 aa11.14□□□□□ -0.63
DNMT1-203ENST00000540357 ADH4P08319 380 aa11.14□□□□□ -0.63
DNMT1-203ENST00000540357 COX5BP10606 129 aa11.14□□□□□ -0.63
DNMT1-203ENST00000540357 CASP6P55212 293 aa11.14□□□□□ -0.63
DNMT1-203ENST00000540357 PLGLAQ15195 96 aa11.14□□□□□ -0.63
DNMT1-203ENST00000540357 SRSF7Q16629 238 aaKnown RBP eCLIP11.14□□□□□ -0.63
DNMT1-203ENST00000540357 AARDQ4LEZ3 155 aa11.14□□□□□ -0.63
DNMT1-203ENST00000540357 SSMEM1Q8WWF3 244 aa11.14□□□□□ -0.63
DNMT1-203ENST00000540357 FAM131CQ96AQ9 280 aa11.14□□□□□ -0.63
DNMT1-203ENST00000540357 PXMP4Q9Y6I8 212 aa11.14□□□□□ -0.63
DNMT1-203ENST00000540357 CLDN14O95500 239 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 IZUMO4Q1ZYL8 232 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 CXorf67Q86X51 503 aaPredicted RBP11.13□□□□□ -0.63
DNMT1-203ENST00000540357 WDFY1Q8IWB7 410 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 LYPD6BQ8NI32 183 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 DEFB127Q9H1M4 99 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 IL19Q9UHD0 177 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 NUTF2P61970 127 aaKnown RBP11.13□□□□□ -0.63
DNMT1-203ENST00000540357 PMCHL1Q16048 86 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 FADS6Q8N9I5 356 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 MESP1Q9BRJ9 268 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 IER2Q9BTL4 223 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 OR1A1Q9P1Q5 309 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 TRAV9-1A0A075B6T8 112 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 IGHV1-45A0A0A0MS14 117 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 RTP5Q14D33 572 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 HLA-BQ31612 363 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 NPVFQ9HCQ7 196 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 TCL1AP56279 114 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 OR1C1Q15619 314 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 SRXN1Q9BYN0 137 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 GSX1Q9H4S2 264 aaPredicted RBP11.13□□□□□ -0.63
DNMT1-203ENST00000540357 ALPK3Q96L96 1907 aa11.13□□□□□ -0.63
DNMT1-203ENST00000540357 PMS2P1A4D2B8 440 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 OR2H2O95918 312 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 HPRT1P00492 218 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 PCP4P48539 62 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 FABP6P51161 128 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 SSPNQ14714 243 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 MRPL54Q6P161 138 aaKnown RBP11.12□□□□□ -0.63
DNMT1-203ENST00000540357 RNF144BQ7Z419 303 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 ADTRPQ96IZ2 230 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 WFIKKN1Q96NZ8 548 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 PNRC2Q9NPJ4 139 aaKnown RBP11.12□□□□□ -0.63
DNMT1-203ENST00000540357 HLA-DQA1P01909 254 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 MIEN1Q9BRT3 115 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 GABRA6Q16445 453 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 NFAM1Q8NET5 270 aaPredicted RBP11.12□□□□□ -0.63
DNMT1-203ENST00000540357 TMEM191AQ9H0A3 160 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 SMOC1Q9H4F8 434 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 LOXL2Q9Y4K0 774 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 TRGV10A0A0A0MS01 117 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 LRRC30A6NM36 301 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 IL3RAP26951 378 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 NUBP1P53384 320 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 ETFRF1Q6IPR1 90 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 OR1L4Q8NGR5 311 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 NPCDR1Q9BY65 106 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 KIF26BQ2KJY2 2108 aa11.12□□□□□ -0.63
DNMT1-203ENST00000540357 TRAV38-1A0A0B4J264 116 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 GZMHP20718 246 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 RND2P52198 227 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 CALHM1Q8IU99 346 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 DUSP15Q9H1R2 295 aaPredicted RBP11.11□□□□□ -0.63
DNMT1-203ENST00000540357 CHCHD2Q9Y6H1 151 aaPredicted RBP11.11□□□□□ -0.63
DNMT1-203ENST00000540357 IGLV3-19P01714 112 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 IL15RAQ13261 267 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 TRIM61Q5EBN2 209 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 VHLLQ6RSH7 139 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 C19orf35Q6ZS72 473 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 HELZP42694 1942 aaKnown RBP11.11□□□□□ -0.63
DNMT1-203ENST00000540357 A0A1W2PR77 199 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 ZG16O60844 167 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 SNRPCP09234 159 aaKnown RBP11.11□□□□□ -0.63
DNMT1-203ENST00000540357 SPSB3Q6PJ21 355 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 RBM14Q96PK6 669 aaKnown RBP11.11□□□□□ -0.63
DNMT1-203ENST00000540357 IL36RNQ9UBH0 155 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 HS3ST3B1Q9Y662 390 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 GRIFINA4D1Z8 144 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 AGMATQ9BSE5 352 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 TWSG1Q9GZX9 223 aa11.11□□□□□ -0.63
DNMT1-203ENST00000540357 MDC1Q14676 2089 aaKnown RBP11.1□□□□□ -0.63
DNMT1-203ENST00000540357 KIAA0100Q14667 2235 aaKnown RBP11.1□□□□□ -0.63
DNMT1-203ENST00000540357 MKRN2OSH3BPM6 223 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 SPINK2P20155 84 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 NPY1RP25929 384 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 UBE2L3P68036 154 aaKnown RBP11.1□□□□□ -0.63
DNMT1-203ENST00000540357 RSPO4Q2I0M5 234 aaPredicted RBP11.1□□□□□ -0.63
DNMT1-203ENST00000540357 OR8I2Q8N0Y5 310 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 DRAM1Q8N682 238 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 YTHDF2Q9Y5A9 579 aaKnown RBP11.1□□□□□ -0.63
DNMT1-203ENST00000540357 MISP3Q96FF7 219 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 C1orf147Q96MC9 270 aaPredicted RBP11.1□□□□□ -0.63
DNMT1-203ENST00000540357 IMMP2LQ96T52 175 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 C1QTNF5Q9BXJ0 243 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 TCF20Q9UGU0 1960 aaKnown RBP11.1□□□□□ -0.63
DNMT1-203ENST00000540357 IGKV1D-13A0A0B4J2D9 117 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 ENSAO43768 121 aaKnown RBP11.1□□□□□ -0.63
DNMT1-203ENST00000540357 ARL14EPLP0DKL9 152 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms