RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 TRBV6-7A0A0A0MS04 114 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 S1PR2O95136 353 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 ATG4DQ86TL0 474 aaPredicted RBP9.52□□□□□ -0.89
PBX1-212ENST00000540236 TGIF2LYQ8IUE0 185 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 TAF15Q92804 592 aaKnown RBP eCLIP9.52□□□□□ -0.89
PBX1-212ENST00000540236 FAM131CQ96AQ9 280 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 ATP23Q9Y6H3 246 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 SCN5AQ14524 2016 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.52□□□□□ -0.89
PBX1-212ENST00000540236 DEGS1O15121 323 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 MT-CO3P00414 261 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.52□□□□□ -0.89
PBX1-212ENST00000540236 DEPPQ9NTK1 212 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 IGKV1D-43A0A0B4J1Z2 117 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 IGFBP2P18065 325 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 SOX8P57073 446 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 RPS21P63220 83 aaKnown RBP9.52□□□□□ -0.89
PBX1-212ENST00000540236 PRSS57Q6UWY2 283 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 MKXQ8IYA7 352 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 IGKV1D-42A0A075B6H8 117 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 SH2D7A6NKC9 451 aaPredicted RBP9.52□□□□□ -0.89
PBX1-212ENST00000540236 LEPROTL1O95214 131 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 SRSF4Q08170 494 aaKnown RBP9.52□□□□□ -0.89
PBX1-212ENST00000540236 EDDM3AQ14507 147 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 ZIC1Q15915 447 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 FAM110CQ1W6H9 321 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 ZNF324BQ6AW86 544 aaPredicted RBP9.52□□□□□ -0.89
PBX1-212ENST00000540236 TMEM136Q6ZRR5 245 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 ZNF488Q96MN9 340 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 TMEM222Q9H0R3 208 aa9.52□□□□□ -0.89
PBX1-212ENST00000540236 UBE2NP61088 152 aaKnown RBP9.51□□□□□ -0.89
PBX1-212ENST00000540236 CYP2G1PQ6ZSU1 146 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 TRAV9-2A0A087WT02 112 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 VN1R4Q7Z5H5 301 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 NOXO1Q8NFA2 376 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 TMEM147Q9BVK8 224 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 CHRNA10Q9GZZ6 450 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 A0A096LPE4 126 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 KIR2DL5BA0A0G2JN68 375 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 KIR2DL5BA0A0G2JPC4 375 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 A0A1W2PPZ6 126 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 FAM181BA6NEQ2 426 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 C3orf80F5H4A9 247 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 H7C2G1 150 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 NAPSAO96009 420 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 GRPP07492 148 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 KIR2DL5AQ8N109 375 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 LRRC3BQ96PB8 259 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 SERGEFQ9UGK8 458 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 HSPB2A8KAH6 182 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 HSPB2Q16082 182 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 KCNMB1Q16558 191 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 MIC13Q5XKP0 118 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 SLC35E4Q6ICL7 350 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 OR1F12Q8NHA8 337 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 ZNF324O75467 553 aaPredicted RBP9.51□□□□□ -0.89
PBX1-212ENST00000540236 CRYBB3P26998 211 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 RPL8P62917 257 aaKnown RBP9.51□□□□□ -0.89
PBX1-212ENST00000540236 LHFPL2Q6ZUX7 228 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 CXorf67Q86X51 503 aaPredicted RBP9.51□□□□□ -0.89
PBX1-212ENST00000540236 SPACA9Q96E40 222 aaPredicted RBP9.51□□□□□ -0.89
PBX1-212ENST00000540236 RCHY1Q96PM5 261 aa9.51□□□□□ -0.89
PBX1-212ENST00000540236 TRAV26-1A0A087WT03 109 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 CELA3AP09093 270 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 FOXF1Q12946 379 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 C1orf122Q6ZSJ8 110 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 C20orf144Q9BQM9 153 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 LOC107984156A0A0G2JMH3 177 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 ALG1L2C9J202 215 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 K7EMI3 77 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 LYPD3O95274 346 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 IGLC2P0DOY2 106 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 IGLC3P0DOY3 106 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 GATA2P23769 480 aaPredicted RBP9.5□□□□□ -0.89
PBX1-212ENST00000540236 PSMB2P49721 201 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 ARL17AQ8IVW1 177 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 FLYWCH2Q96CP2 140 aaKnown RBP9.5□□□□□ -0.89
PBX1-212ENST00000540236 GPX7Q96SL4 187 aaPredicted RBP9.5□□□□□ -0.89
PBX1-212ENST00000540236 ZSWIM8A7E2V4 1837 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 MT-ATP6P00846 226 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 IBA57Q5T440 356 aaKnown RBP9.5□□□□□ -0.89
PBX1-212ENST00000540236 RBMXL3Q8N7X1 1067 aaKnown RBP9.5□□□□□ -0.89
PBX1-212ENST00000540236 LRRC61Q9BV99 259 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 SPAG17Q6Q759 2223 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 TRPM7Q96QT4 1865 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 HELZP42694 1942 aaKnown RBP9.5□□□□□ -0.89
PBX1-212ENST00000540236 MEF2CQ06413 473 aaPredicted RBP9.5□□□□□ -0.89
PBX1-212ENST00000540236 SPATA46Q5T0L3 261 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 TMEM70Q9BUB7 260 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 A0A1B0GWB2 263 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 A0A1W2PS18 150 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 PRRT4C9JH25 899 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 ENSAO43768 121 aaKnown RBP9.5□□□□□ -0.89
PBX1-212ENST00000540236 SMIM13P0DJ93 91 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 CT45A6P0DMU7 189 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 CT45A5P0DMU8 189 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 CT45A7P0DMV0 189 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 KRTCAP3Q53RY4 240 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 CT45A1Q5HYN5 189 aa9.5□□□□□ -0.89
PBX1-212ENST00000540236 C1orf100Q5SVJ3 147 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms