RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 KIR2DL2P43627 348 aaPredicted RBP5.6□□□□□ -1.51
LSAMP-207ENST00000539563 MEOX2P50222 304 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 FAM3BP58499 235 aaPredicted RBP5.6□□□□□ -1.51
LSAMP-207ENST00000539563 MRPL30Q8TCC3 161 aaKnown RBP5.6□□□□□ -1.51
LSAMP-207ENST00000539563 TMEM54Q969K7 222 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 RABAC1Q9UI14 185 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 COL4A5P29400 1685 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 SCTP09683 121 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 SP9P0CG40 484 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 SNAI3Q3KNW1 292 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 TMEM78Q5T7P6 136 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 UNQ9370/PRO34162Q6UXP9 181 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 AQP3Q92482 292 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 GP6Q9HCN6 339 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 FUT9Q9Y231 359 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 RHBDL1O75783 438 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 TCL1AP56279 114 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 PCSK4Q6UW60 755 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 CCL13Q99616 98 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 RBKSQ9H477 322 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 ELOVL5Q9NYP7 299 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 ARID1AO14497 2285 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 IGLV1-36A0A0B4J1U3 117 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 A6NDN8 102 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 COX6A1P12074 109 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 MFAP4P55083 255 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 SIP14410 1827 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 ZNF207O43670 478 aaKnown RBP5.6□□□□□ -1.51
LSAMP-207ENST00000539563 HLA-DQB1P01920 261 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 CSN3P07498 182 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 SMIM6P0DI80 62 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 FCARP24071 287 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 RPL8P62917 257 aaKnown RBP5.6□□□□□ -1.51
LSAMP-207ENST00000539563 C1orf100Q5SVJ3 147 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 C19orf24Q9BVV8 132 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 TRBV5-7A0A0A0MS05 114 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 HTN1P15515 57 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 REG1BP48304 166 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 RPS20P60866 119 aaKnown RBP5.59□□□□□ -1.51
LSAMP-207ENST00000539563 FHL5Q5TD97 284 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 LAMTOR1Q6IAA8 161 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 WFDC3Q8IUB2 231 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 ITLN1Q8WWA0 313 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 LSM10Q969L4 123 aaKnown RBP5.59□□□□□ -1.51
LSAMP-207ENST00000539563 CISD1Q9NZ45 108 aaKnown RBP5.59□□□□□ -1.51
LSAMP-207ENST00000539563 ZFP30Q9Y2G7 519 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 PTPRDP23468 1912 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 A0A087X0M5 115 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 A0A1B0GX30 115 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 C5orf52A6NGY3 159 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 UBE2L6O14933 153 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 CCL8P80075 99 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 ZNF880Q6PDB4 577 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 ZPLD1Q8TCW7 415 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 LINC00470Q9BZP3 86 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 FAM206AQ9NX38 181 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 CYB5R3P00387 301 aaPredicted RBP5.59□□□□□ -1.51
LSAMP-207ENST00000539563 APELAP0DMC3 54 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 IER3P46695 156 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 PSG9Q00887 426 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 IGSF11Q5DX21 431 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 RBM14Q96PK6 669 aaKnown RBP5.59□□□□□ -1.51
LSAMP-207ENST00000539563 TMEM222Q9H0R3 208 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 FOXD3Q9UJU5 478 aaPredicted RBP5.59□□□□□ -1.51
LSAMP-207ENST00000539563 SIRT4Q9Y6E7 314 aaPredicted RBP5.59□□□□□ -1.51
LSAMP-207ENST00000539563 CELA2AP08217 269 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 DNM1P46Q6ZS02 220 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 DLL3Q9NYJ7 618 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 JPT1Q9UK76 154 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 SNRNP200O75643 2136 aaKnown RBP5.59□□□□□ -1.51
LSAMP-207ENST00000539563 LOC390937A0A1W2PQ73 354 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 TMEM189A5PLL7 270 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 RPL29P47914 159 aaKnown RBP5.59□□□□□ -1.51
LSAMP-207ENST00000539563 ATP5IP56385 69 aaPredicted RBP5.59□□□□□ -1.51
LSAMP-207ENST00000539563 FUT5Q11128 374 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 SRSF9Q13242 221 aaKnown RBP eCLIP5.59□□□□□ -1.51
LSAMP-207ENST00000539563 OR4C13Q8NGP0 309 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 ISOC2Q96AB3 205 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 ZNF488Q96MN9 340 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 RNF115Q9Y4L5 304 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 HS3ST3B1Q9Y662 390 aa5.59□□□□□ -1.51
LSAMP-207ENST00000539563 J3KRW8 73 aa5.59□□□□□ -1.52
LSAMP-207ENST00000539563 MT-ND6P03923 174 aa5.59□□□□□ -1.52
LSAMP-207ENST00000539563 UCP3P55916 312 aa5.59□□□□□ -1.52
LSAMP-207ENST00000539563 PKIAP61925 76 aa5.59□□□□□ -1.52
LSAMP-207ENST00000539563 CTHRC1Q96CG8 243 aa5.59□□□□□ -1.52
LSAMP-207ENST00000539563 ELOVL1Q9BW60 279 aa5.59□□□□□ -1.52
LSAMP-207ENST00000539563 COL25A1Q9BXS0 654 aaPredicted RBP5.59□□□□□ -1.52
LSAMP-207ENST00000539563 GPR132Q9UNW8 380 aa5.59□□□□□ -1.52
LSAMP-207ENST00000539563 ODAMA1E959 279 aa5.59□□□□□ -1.52
LSAMP-207ENST00000539563 PGLYRP1O75594 196 aaPredicted RBP5.59□□□□□ -1.52
LSAMP-207ENST00000539563 ACAA1P09110 424 aaPredicted RBP5.59□□□□□ -1.52
LSAMP-207ENST00000539563 BCL2P10415 239 aa5.59□□□□□ -1.52
LSAMP-207ENST00000539563 CD40P25942 277 aa5.59□□□□□ -1.52
LSAMP-207ENST00000539563 RAB9AP51151 201 aa5.59□□□□□ -1.52
LSAMP-207ENST00000539563 MRPL54Q6P161 138 aaKnown RBP5.59□□□□□ -1.52
LSAMP-207ENST00000539563 PACRGQ96M98 296 aaPredicted RBP5.59□□□□□ -1.52
LSAMP-207ENST00000539563 ZMAT5Q9UDW3 170 aaKnown RBP5.59□□□□□ -1.52
LSAMP-207ENST00000539563 HILPDAQ9Y5L2 63 aa5.59□□□□□ -1.52
LSAMP-207ENST00000539563 LHFPL6Q9Y693 200 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms