RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 MS4A7Q9GZW8 240 aaPredicted RBP10.49□□□□□ -0.73
CCDC42-202ENST00000539522 GPN1Q9HCN4 374 aaPredicted RBP10.49□□□□□ -0.73
CCDC42-202ENST00000539522 OR2S2Q9NQN1 319 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 SLC23A1Q9UHI7 598 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 JPT1Q9UK76 154 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 GPR132Q9UNW8 380 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 OR5H14A6NHG9 310 aa10.48□□□□□ -0.73
CCDC42-202ENST00000539522 BET1O15155 118 aa10.48□□□□□ -0.73
CCDC42-202ENST00000539522 YPEL1O60688 119 aa10.48□□□□□ -0.73
CCDC42-202ENST00000539522 LY6G6FQ5SQ64 297 aa10.48□□□□□ -0.73
CCDC42-202ENST00000539522 AADACL3Q5VUY0 350 aa10.48□□□□□ -0.73
CCDC42-202ENST00000539522 MARCH1Q8TCQ1 289 aa10.48□□□□□ -0.73
CCDC42-202ENST00000539522 CHAC2Q8WUX2 184 aa10.48□□□□□ -0.73
CCDC42-202ENST00000539522 IL1F10Q8WWZ1 152 aa10.48□□□□□ -0.73
CCDC42-202ENST00000539522 YPEL2Q96QA6 119 aa10.48□□□□□ -0.73
CCDC42-202ENST00000539522 ZNF251Q9BRH9 671 aa10.48□□□□□ -0.73
CCDC42-202ENST00000539522 MEGF9Q9H1U4 602 aa10.48□□□□□ -0.73
CCDC42-202ENST00000539522 IFI27L2Q9H2X8 130 aa10.48□□□□□ -0.73
CCDC42-202ENST00000539522 TBL2Q9Y4P3 447 aaKnown RBP10.48□□□□□ -0.73
CCDC42-202ENST00000539522 ALG5Q9Y673 324 aa10.48□□□□□ -0.73
CCDC42-202ENST00000539522 A0A0A6YYJ9 748 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 C7orf66A4D0T2 115 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 HMX3A6NHT5 357 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 SNRPGP15A8MWD9 76 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 PFDN1O60925 122 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 TUSC2O75896 110 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 IGHV4-59P01825 116 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 ANXA7P20073 488 aaKnown RBP10.47□□□□□ -0.73
CCDC42-202ENST00000539522 ZBTB25P24278 435 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 ZNF137PP52743 207 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 TAS2R31P59538 309 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 HERV-K104P61576 105 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 Q3ZCU0 254 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 GLDNQ6ZMI3 551 aaPredicted RBP10.47□□□□□ -0.73
CCDC42-202ENST00000539522 SLC25A42Q86VD7 318 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 TEX29Q8N6K0 151 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 MRGPRFQ96AM1 343 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 MOB3AQ96BX8 217 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 GHITMQ9H3K2 345 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 GNG12Q9UBI6 72 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 VSIG4Q9Y279 399 aa10.47□□□□□ -0.73
CCDC42-202ENST00000539522 JMJD1CQ15652 2540 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 A0A0B4J293 547 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 A0A1W2PPI3 338 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 DNAJC9-AS1A6NH13 148 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 ST8SIA5O15466 376 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 HSPA12AO43301 675 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 HOXA3O43365 443 aaPredicted RBP10.46□□□□□ -0.73
CCDC42-202ENST00000539522 PPYP01298 95 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 CTSDP07339 412 aaPredicted RBP10.46□□□□□ -0.73
CCDC42-202ENST00000539522 PGAM2P15259 253 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 AADACP22760 399 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 NFYAP23511 347 aaPredicted RBP10.46□□□□□ -0.73
CCDC42-202ENST00000539522 HTR1DP28221 377 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 CEACAM6P40199 344 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 IER3P46695 156 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 RAB13P51153 203 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 HILS1P60008 231 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 UBE2MP61081 183 aaKnown RBP10.46□□□□□ -0.73
CCDC42-202ENST00000539522 SLC9A3R2Q15599 337 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 SSX2Q16385 188 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 TPTE2P1Q5T6R2 138 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 MINOS1Q5TGZ0 78 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 TMED4Q7Z7H5 227 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 H1FOOQ8IZA3 346 aaPredicted RBP10.46□□□□□ -0.73
CCDC42-202ENST00000539522 CFHR4Q92496 578 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 TAF15Q92804 592 aaKnown RBP eCLIP10.46□□□□□ -0.73
CCDC42-202ENST00000539522 DUX5Q96PT3 197 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 RTBDNQ9BSG5 229 aaPredicted RBP10.46□□□□□ -0.73
CCDC42-202ENST00000539522 OR51J1Q9H342 316 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 BEX1Q9HBH7 125 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 RDH8Q9NYR8 311 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 C14orf166Q9Y224 244 aaKnown RBP10.46□□□□□ -0.73
CCDC42-202ENST00000539522 OR2W1Q9Y3N9 320 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 HILPDAQ9Y5L2 63 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 MINOS1-NBL1R4GNA1 71 aa10.46□□□□□ -0.73
CCDC42-202ENST00000539522 IGKV1D-13A0A0B4J2D9 117 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 RGS11O94810 467 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 IGLV2-14P01704 120 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 OR4E1P0C645 316 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 TRAPPC2P0DI81 140 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 TRAPPC2BP0DI82 140 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 IGKV1-13P0DP09 117 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 VSIG10L2P0DP72 767 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 LINC00205P59089 165 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 DHODHQ02127 395 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 C4orf46Q504U0 113 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 TMEM128Q5BJH2 165 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 C11orf88Q6PI97 169 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 SLC38A6Q8IZM9 456 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 MALSU1Q96EH3 234 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 ZNF486Q96H40 463 aaPredicted RBP10.45□□□□□ -0.74
CCDC42-202ENST00000539522 ABHD14BQ96IU4 210 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 ABHD14AQ9BUJ0 271 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 MED28Q9H204 178 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 C5orf66Q9H5L9 145 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 DPM3Q9P2X0 92 aa10.45□□□□□ -0.74
CCDC42-202ENST00000539522 SAA2-SAA4A0A096LPE2 208 aa10.44□□□□□ -0.74
CCDC42-202ENST00000539522 TOR1AO14656 332 aa10.44□□□□□ -0.74
CCDC42-202ENST00000539522 ITGB1BP1O14713 200 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms