RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 RAB5BP61020 215 aa20.8■□□□□ 0.92
RAB40C-204ENST00000538492 ZNF506Q5JVG8 444 aa20.8■□□□□ 0.92
RAB40C-204ENST00000538492 LCN15Q6UWW0 184 aa20.8■□□□□ 0.92
RAB40C-204ENST00000538492 TUBA4BQ9H853 241 aa20.8■□□□□ 0.92
RAB40C-204ENST00000538492 CLN8Q9UBY8 286 aa20.8■□□□□ 0.92
RAB40C-204ENST00000538492 UBE2L5PA0A1B0GUS4 154 aa20.8■□□□□ 0.92
RAB40C-204ENST00000538492 MBD3L4A6NDZ8 208 aaPredicted RBP20.8■□□□□ 0.92
RAB40C-204ENST00000538492 MBD3L3A6NE82 208 aaPredicted RBP20.8■□□□□ 0.92
RAB40C-204ENST00000538492 MBD3L5A6NJ08 208 aaPredicted RBP20.8■□□□□ 0.92
RAB40C-204ENST00000538492 LRRC75BQ2VPJ9 315 aa20.8■□□□□ 0.92
RAB40C-204ENST00000538492 MBD3L2Q8NHZ7 208 aaPredicted RBP20.8■□□□□ 0.92
RAB40C-204ENST00000538492 RIF1Q5UIP0 2472 aaKnown RBP20.79■□□□□ 0.92
RAB40C-204ENST00000538492 LINC00473A8K010 186 aa20.79■□□□□ 0.92
RAB40C-204ENST00000538492 M0R1B8 84 aa20.79■□□□□ 0.92
RAB40C-204ENST00000538492 EIF3GO75821 320 aaKnown RBP eCLIP20.79■□□□□ 0.92
RAB40C-204ENST00000538492 FGF8P55075 233 aaPredicted RBP20.79■□□□□ 0.92
RAB40C-204ENST00000538492 SLC38A11Q08AI6 406 aa20.79■□□□□ 0.92
RAB40C-204ENST00000538492 Q3ZCU0 254 aa20.79■□□□□ 0.92
RAB40C-204ENST00000538492 SPRNQ5BIV9 151 aa20.79■□□□□ 0.92
RAB40C-204ENST00000538492 SSX7Q7RTT5 188 aa20.79■□□□□ 0.92
RAB40C-204ENST00000538492 S100PBPQ96BU1 408 aa20.79■□□□□ 0.92
RAB40C-204ENST00000538492 HSPB7Q9UBY9 170 aa20.79■□□□□ 0.92
RAB40C-204ENST00000538492 ICE1Q9Y2F5 2266 aa20.79■□□□□ 0.92
RAB40C-204ENST00000538492 C1orf196B1AJZ1 125 aa20.79■□□□□ 0.92
RAB40C-204ENST00000538492 FAM90A26D6RGX4 464 aa20.79■□□□□ 0.92
RAB40C-204ENST00000538492 MSMO1Q15800 293 aa20.79■□□□□ 0.92
RAB40C-204ENST00000538492 ZNF726P1Q15940 193 aa20.79■□□□□ 0.92
RAB40C-204ENST00000538492 LURAP1Q96LR2 239 aa20.79■□□□□ 0.92
RAB40C-204ENST00000538492 IGHV3OR15-7A0A075B7D8 119 aa20.78■□□□□ 0.92
RAB40C-204ENST00000538492 LRRC30A6NM36 301 aa20.78■□□□□ 0.92
RAB40C-204ENST00000538492 CD55P08174 381 aa20.78■□□□□ 0.92
RAB40C-204ENST00000538492 P0C879 139 aa20.78■□□□□ 0.92
RAB40C-204ENST00000538492 ELLP55199 621 aaPredicted RBP20.78■□□□□ 0.92
RAB40C-204ENST00000538492 VHLLQ6RSH7 139 aa20.78■□□□□ 0.92
RAB40C-204ENST00000538492 WDR61Q9GZS3 305 aaKnown RBP20.78■□□□□ 0.92
RAB40C-204ENST00000538492 TOLLIPQ9H0E2 274 aa20.78■□□□□ 0.92
RAB40C-204ENST00000538492 UNKLQ9H9P5 680 aaKnown RBP20.78■□□□□ 0.92
RAB40C-204ENST00000538492 ZFP92A6NM28 416 aa20.78■□□□□ 0.92
RAB40C-204ENST00000538492 HSPB1P04792 205 aaKnown RBP20.78■□□□□ 0.92
RAB40C-204ENST00000538492 ZNF474Q6S9Z5 364 aaPredicted RBP20.78■□□□□ 0.92
RAB40C-204ENST00000538492 IGKV1D-17A0A075B6S4 117 aa20.77■□□□□ 0.92
RAB40C-204ENST00000538492 HOXA1P49639 335 aaPredicted RBP20.77■□□□□ 0.92
RAB40C-204ENST00000538492 RPS16P62249 146 aaKnown RBP20.77■□□□□ 0.92
RAB40C-204ENST00000538492 RPS23P62266 143 aaKnown RBP20.77■□□□□ 0.92
RAB40C-204ENST00000538492 SPINK9Q5DT21 86 aa20.77■□□□□ 0.92
RAB40C-204ENST00000538492 IGF2-ASQ6U949 168 aa20.77■□□□□ 0.92
RAB40C-204ENST00000538492 ZNF429Q86V71 674 aa20.77■□□□□ 0.92
RAB40C-204ENST00000538492 ZDHHC16Q969W1 377 aa20.77■□□□□ 0.92
RAB40C-204ENST00000538492 RAB39BQ96DA2 213 aa20.77■□□□□ 0.92
RAB40C-204ENST00000538492 HIPK2Q9H2X6 1198 aa20.77■□□□□ 0.92
RAB40C-204ENST00000538492 ZNF665Q9H7R5 613 aa20.77■□□□□ 0.92
RAB40C-204ENST00000538492 SPINT2O43291 252 aa20.77■□□□□ 0.91
RAB40C-204ENST00000538492 RBMXL2O75526 392 aaKnown RBP20.77■□□□□ 0.91
RAB40C-204ENST00000538492 PLA2G5P39877 138 aa20.77■□□□□ 0.91
RAB40C-204ENST00000538492 ZNF787Q6DD87 383 aa20.77■□□□□ 0.91
RAB40C-204ENST00000538492 TMEM14EPQ6UXP3 125 aa20.77■□□□□ 0.91
RAB40C-204ENST00000538492 PSMG3Q9BT73 122 aaPredicted RBP20.77■□□□□ 0.91
RAB40C-204ENST00000538492 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.77■□□□□ 0.91
RAB40C-204ENST00000538492 C15orf65H3BRN8 121 aa20.76■□□□□ 0.91
RAB40C-204ENST00000538492 PPIHO43447 177 aaKnown RBP20.76■□□□□ 0.91
RAB40C-204ENST00000538492 ZNF737O75373 536 aa20.76■□□□□ 0.91
RAB40C-204ENST00000538492 RAB5AP20339 215 aa20.76■□□□□ 0.91
RAB40C-204ENST00000538492 SNRPEP62304 92 aaKnown RBP20.76■□□□□ 0.91
RAB40C-204ENST00000538492 RNF212Q495C1 297 aa20.76■□□□□ 0.91
RAB40C-204ENST00000538492 AGMATQ9BSE5 352 aa20.76■□□□□ 0.91
RAB40C-204ENST00000538492 FAM215AQ9Y5M1 114 aa20.76■□□□□ 0.91
RAB40C-204ENST00000538492 MAP1BP46821 2468 aaKnown RBP20.76■□□□□ 0.91
RAB40C-204ENST00000538492 TRAV1-1A0A0B4J248 108 aa20.76■□□□□ 0.91
RAB40C-204ENST00000538492 PCP4L1A6NKN8 68 aa20.76■□□□□ 0.91
RAB40C-204ENST00000538492 ZNF727A8MUV8 499 aa20.76■□□□□ 0.91
RAB40C-204ENST00000538492 ZG16O60844 167 aa20.76■□□□□ 0.91
RAB40C-204ENST00000538492 RCC1LQ96I51 464 aaKnown RBP20.76■□□□□ 0.91
RAB40C-204ENST00000538492 A0A1B0GWJ7 208 aa20.75■□□□□ 0.91
RAB40C-204ENST00000538492 OR2C1O95371 312 aa20.75■□□□□ 0.91
RAB40C-204ENST00000538492 IGHV3-13P01766 116 aa20.75■□□□□ 0.91
RAB40C-204ENST00000538492 IGHV3-7P01780 117 aa20.75■□□□□ 0.91
RAB40C-204ENST00000538492 ADAM5Q6NVV9 412 aa20.75■□□□□ 0.91
RAB40C-204ENST00000538492 H2BFWTQ7Z2G1 175 aa20.75■□□□□ 0.91
RAB40C-204ENST00000538492 TAF15Q92804 592 aaKnown RBP eCLIP20.75■□□□□ 0.91
RAB40C-204ENST00000538492 OR2V2Q96R30 315 aa20.75■□□□□ 0.91
RAB40C-204ENST00000538492 ZFHX2Q9C0A1 2572 aaPredicted RBP20.75■□□□□ 0.91
RAB40C-204ENST00000538492 CEP250Q9BV73 2442 aa20.75■□□□□ 0.91
RAB40C-204ENST00000538492 LOC102723971A0A1B0GUV8 181 aa20.75■□□□□ 0.91
RAB40C-204ENST00000538492 SRRM5B3KS81 715 aa20.75■□□□□ 0.91
RAB40C-204ENST00000538492 MZT1Q08AG7 82 aa20.75■□□□□ 0.91
RAB40C-204ENST00000538492 KHDC3LQ587J8 217 aa20.75■□□□□ 0.91
RAB40C-204ENST00000538492 CLDN14O95500 239 aa20.74■□□□□ 0.91
RAB40C-204ENST00000538492 TAGLN2P37802 199 aaKnown RBP20.74■□□□□ 0.91
RAB40C-204ENST00000538492 GCSAMQ8N6F7 178 aa20.74■□□□□ 0.91
RAB40C-204ENST00000538492 ZNRF1Q8ND25 227 aa20.74■□□□□ 0.91
RAB40C-204ENST00000538492 SMG1Q96Q15 3661 aaKnown RBP20.74■□□□□ 0.91
RAB40C-204ENST00000538492 K7EM74 188 aa20.74■□□□□ 0.91
RAB40C-204ENST00000538492 DLK1P80370 383 aa20.74■□□□□ 0.91
RAB40C-204ENST00000538492 SERF2P84101 59 aa20.74■□□□□ 0.91
RAB40C-204ENST00000538492 MOGAT3Q86VF5 341 aa20.74■□□□□ 0.91
RAB40C-204ENST00000538492 GNG12Q9UBI6 72 aa20.74■□□□□ 0.91
RAB40C-204ENST00000538492 OR2B8PP59922 312 aa20.73■□□□□ 0.91
RAB40C-204ENST00000538492 FAM169BQ8N8A8 192 aa20.73■□□□□ 0.91
RAB40C-204ENST00000538492 DTD1Q8TEA8 209 aa20.73■□□□□ 0.91
RAB40C-204ENST00000538492 SPRY3O43610 288 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms